RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NMES1Q9C002 83 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 TBL2Q9Y4P3 447 aaKnown RBP15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 BAHCC1Q9P281 2608 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 TXNL1O43396 289 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 RAMP3O60896 148 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 SERPINE2P07093 398 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 ZNF816Q0VGE8 651 aaPredicted RBP15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 IL15RAQ13261 267 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 TPTE2P1Q5T6R2 138 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 ZNF695Q8IW36 515 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 SPAG16Q8N0X2 631 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 CD300LFQ8TDQ1 290 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 RBPMSQ93062 196 aaKnown RBP15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 C2orf50Q96LR7 162 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 NABP2Q9BQ15 211 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 TMED3Q9Y3Q3 217 aa15.3■□□□□ 0.04
PDLIM3-202ENST00000284770 TRAV40A0A0B4J280 105 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IGHV1-69DA0A0B4J2H0 117 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 DUXBA0A1W2PPF3 345 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 NPFFO15130 113 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IFNA21P01568 189 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IGKV1-39P01597 117 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IGHV1-69P01742 117 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IGKV1D-39P04432 117 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 EPHA1P21709 976 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 KIR2DS2P43631 304 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 OR2B11Q5JQS5 317 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 GPR157Q5UAW9 335 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 OR5AN1Q8NGI8 311 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 FLNBO75369 2602 aaKnown RBP15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 TRAV14DV4A0A0A6YYC5 116 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 FCGR3BO75015 233 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 RPA2P15927 270 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 SAA4P35542 130 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 CYCSP99999 105 aaKnown RBP15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 TAGLNQ01995 201 aaKnown RBP15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 PPP1R1CQ8WVI7 109 aa15.29■□□□□ 0.04
PDLIM3-202ENST00000284770 IGHV1-3A0A0C4DH29 117 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 RBFOX2O43251 390 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 IGHV4-38-2P0DP08 117 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 LPAR6P43657 344 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 IAH1Q2TAA2 248 aaPredicted RBP15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 MALSU1Q96EH3 234 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 HILPDAQ9Y5L2 63 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 AKAP9Q99996 3911 aa15.28■□□□□ 0.04
PDLIM3-202ENST00000284770 ZNF469Q96JG9 3925 aaPredicted RBP15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 IGHV3OR16-10A0A075B7F0 116 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 PIGBOS1A0A0B4J2F0 54 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 OOSP1A8MZH6 123 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 H0YJW9 148 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 VDAC1P21796 283 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 SSX2Q16385 188 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 NMSQ5H8A3 153 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 KLF17Q5JT82 389 aaPredicted RBP15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 C17orf50Q8WW18 174 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 AJUBAQ96IF1 538 aa15.27■□□□□ 0.04
PDLIM3-202ENST00000284770 SVEP1Q4LDE5 3571 aa15.27■□□□□ 0.03
PDLIM3-202ENST00000284770 A0A1W2PPI3 338 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 APOA2P02652 100 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 RRASP10301 218 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 FGL1Q08830 312 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 RTL8BQ17RB0 113 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 OR8H3Q8N146 312 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 OR4S2Q8NH73 311 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 SLC35D1Q9NTN3 355 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 HPRT1P00492 218 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 MC5RP33032 325 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 RUSC1-AS1Q66K80 236 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 LAMTOR1Q6IAA8 161 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 CCDC144NLQ6NUI1 221 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 MOB3BQ86TA1 216 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 ZBTB8BQ8NAP8 495 aaPredicted RBP15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 GRPEL2Q8TAA5 225 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 PLEKHA2Q9HB19 425 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 MYO9AB2RTY4 2548 aa15.26■□□□□ 0.03
PDLIM3-202ENST00000284770 ZANQ9Y493 2812 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 S1PR2O95136 353 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 MPC2O95563 127 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 PSMB6P28072 239 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 KRTAP1-1Q07627 177 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 LRRC37A5PQ49AS3 106 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 DHRS7BQ6IAN0 325 aaPredicted RBP15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 BRD3OSQ6XYD6 125 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 DYNAPQ8N1N2 210 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 C9orf62Q8N4C0 152 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 COMMD9Q9P000 198 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 GSKIPQ9P0R6 139 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 ABCA1O95477 2261 aa15.25■□□□□ 0.03
PDLIM3-202ENST00000284770 A0A0G2JRQ6 117 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 H7C2Y5 167 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 CD5LO43866 347 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 CRYZL1O95825 349 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 IGKV1-5P01602 117 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 IGKV1-16P04430 117 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 RAB13P51153 203 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 BPIFB3P59826 476 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 HABP2Q14520 560 aaPredicted RBP15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 PDPNQ86YL7 162 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 LSM10Q969L4 123 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms