RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 BVES-AS1Q5T3Y7 98 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 VASH2Q86V25 355 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
CTDSP1-201ENST00000273062 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 LOC102725191A0A1B0GVB3 256 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 SELENOVP59797 346 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 ARF6P62330 175 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 IGFBP7Q16270 282 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 DNM1P34Q6PK57 102 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 DOK3Q7L591 496 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 DEFB125Q8N687 156 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 GP6Q9HCN6 339 aa13.27□□□□□ -0.28
CTDSP1-201ENST00000273062 S1PR2O95136 353 aa13.27□□□□□ -0.29
CTDSP1-201ENST00000273062 PSG7Q13046 419 aa13.27□□□□□ -0.29
CTDSP1-201ENST00000273062 PMS2CLQ68D20 193 aa13.27□□□□□ -0.29
CTDSP1-201ENST00000273062 PILRBQ9UKJ0 227 aa13.27□□□□□ -0.29
CTDSP1-201ENST00000273062 MDFIC2A0A1B0GVS7 189 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 CCL1P22362 96 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 TIMP3P35625 211 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 WDR73Q6P4I2 378 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 TRAV9-2A0A087WT02 112 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 TMPRSS2O15393 492 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 SLC35B1P78383 322 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 OR10G9Q8NGN4 311 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 OR10G7Q8NGN6 311 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 PNRC2Q9NPJ4 139 aaKnown RBP13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 PSENENQ9NZ42 101 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 IGLV3-12A0A075B6K2 115 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 CTXND1A0A1B0GTU2 59 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 C5orf17Q8NAS9 161 aa13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 PTRH2Q9Y3E5 179 aaKnown RBP13.26□□□□□ -0.29
CTDSP1-201ENST00000273062 MED12Q93074 2177 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 KIAA1549Q9HCM3 1950 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 PPIAL4EA0A075B759 164 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 PPIAL4CA0A0B4J2A2 164 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 PPIAL4DF5H284 164 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 PPIAL4FP0DN26 164 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 UCP1P25874 307 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 ARF1P84077 181 aaKnown RBP13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 APOBEC3DQ96AK3 386 aaPredicted RBP13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 CCL28Q9NRJ3 127 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 C9orf172C9J069 976 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 CA7P43166 264 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 TRIM61Q5EBN2 209 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 SGCZQ96LD1 299 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 MOB1AQ9H8S9 216 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
CTDSP1-201ENST00000273062 IGKV1-27A0A075B6S5 117 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 H0YJW9 148 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 SIRPB1O00241 398 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 RPS16P62249 146 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 EBLN2Q6P2I7 272 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 ZNF841Q6ZN19 808 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 KIR3DL3Q8N743 410 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 OR10G8Q8NGN5 311 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 OR2Y1Q8NGV0 311 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 OCC1Q8TAD7 63 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 C17orf112F2Z3M2 114 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 LGALS4P56470 323 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 ZNF324BQ6AW86 544 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
CTDSP1-201ENST00000273062 H3BML4 177 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 K7EN84 100 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 CELA2AP08217 269 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 COL8A2P25067 703 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 SRIP30626 198 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 FOXE3Q13461 319 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 CARD17Q5XLA6 110 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 PLCXD3Q63HM9 321 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 OR10G3Q8NGC4 313 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 OR4P4Q8NGL7 312 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 RAB40CQ96S21 281 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 SFXN3Q9BWM7 321 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 GTSF1LQ9H1H1 148 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 OR51H1Q8NH63 302 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
CTDSP1-201ENST00000273062 SYNGR2O43760 224 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 RAMP3O60896 148 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 SSTR5P35346 364 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 GCSAMLQ5JQS6 135 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 KLRF1Q9NZS2 232 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 ABI3Q9P2A4 366 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 SAA2-SAA4A0A096LPE2 208 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms