RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ASXL3Q9C0F0 2248 aa14.45□□□□□ -0.1
TSPAN3-201ENST00000267970 DOCK5Q9H7D0 1870 aa14.45□□□□□ -0.1
TSPAN3-201ENST00000267970 SNRNP200O75643 2136 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 GPR82Q96P67 336 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 PRF1P14222 555 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 HLA-DRB1P01911 266 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 SLC25A38Q96DW6 304 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 C5orf66Q9H5L9 145 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 GDF9O60383 454 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 APOMO95445 188 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 THY1P04216 161 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 C1QTNF9BB2RNN3 333 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 H0Y980 276 aa14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 APOBEC4Q8WW27 367 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-201ENST00000267970 REC114Q7Z4M0 266 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 C10orf35Q96D05 121 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 MEGF9Q9H1U4 602 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 TNFSF14O43557 240 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 FAM19A2Q8N3H0 131 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 IGKV1-8A0A0C4DH67 115 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 hCG_38984A0A1B0GV85 526 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 TJP1Q07157 1748 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 ASAH2BP0C7U1 165 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 DCAF10Q5QP82 559 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 TMEM170BQ5T4T1 132 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 DEFB104AQ8WTQ1 72 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 NPFFR1Q9GZQ6 430 aa14.43□□□□□ -0.1
TSPAN3-201ENST00000267970 GPX1P07203 203 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 FGF12P61328 243 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 FUT5Q11128 374 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 HIST1H2BAQ96A08 127 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 MARVELD3Q96A59 401 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 CALYQ9NYX4 217 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 MPDU1O75352 247 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 GLIPR1P48060 266 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 SAMD13Q5VXD3 122 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 GPR132Q9UNW8 380 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 C7orf66A4D0T2 115 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 ISG15P05161 165 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 TMEM56-RWDD3S4R434 201 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 DLL1O00548 723 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 IGHV4-39P01824 125 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 RPL8P62917 257 aaKnown RBP14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 LRRC3BQ96PB8 259 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 PMCHL2Q9BQD1 86 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 SCNM1Q9BWG6 230 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 DSPPQ9NZW4 1301 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 SYT8Q8NBV8 401 aa14.42□□□□□ -0.1
TSPAN3-201ENST00000267970 SAPCD1Q5SSQ6 148 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 SERF2P84101 59 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 ZNF362Q5T0B9 420 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 DMRT1Q9Y5R6 373 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 SPTBP11277 2137 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 A1L4Q6 167 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 INO80CQ6PI98 192 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 FNDC4Q9H6D8 234 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 NKX2-8O15522 239 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 RPL39P5Q59GN2 51 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 DDB2Q92466 427 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 WBP1LQ9NX94 342 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 CDC42EP3Q9UKI2 254 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 TRBV20OR9-2A0A075B6H5 130 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 NDUFA3O95167 84 aa14.41□□□□□ -0.1
TSPAN3-201ENST00000267970 MPV17P39210 176 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CDX1P47902 265 aaPredicted RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 DUX5Q96PT3 197 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CLDN16Q9Y5I7 305 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 TNRC6CQ9HCJ0 1690 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CKS1BP61024 79 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 SUMO2P61956 95 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 MS4A5Q9H3V2 200 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 WNT9BO14905 357 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 GFI1BQ5VTD9 330 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 SLC22A18ASQ8N1D0 253 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 TMEM45BQ96B21 275 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 DLL3Q9NYJ7 618 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CIRBPQ14011 172 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CENPWQ5EE01 88 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 ALKBH7Q9BT30 221 aaPredicted RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 DNAJC4Q9NNZ3 241 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 DOCK2Q92608 1830 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 CKAP5Q14008 2032 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 PIN1P1O15428 100 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 ZBTB34Q8NCN2 500 aa14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 NFAM1Q8NET5 270 aaPredicted RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 GEMIN7Q9H840 131 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-201ENST00000267970 C4orf51C9J302 202 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 NPIPB6E9PJ23 425 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 MMD2Q8IY49 270 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 OR5AN1Q8NGI8 311 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 TPRP12270 2363 aaKnown RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 M0R381 172 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 TNFRSF9Q07011 255 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 JOSD1Q15040 202 aaPredicted RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 LHFPL4Q7Z7J7 247 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 LINC00596Q86U02 117 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 NIT1Q86X76 327 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 RNASEH2CQ8TDP1 164 aaKnown RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 NPIPB3Q92617 1050 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 MPTX1A8MV57 137 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms