RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ARHGDIBP52566 201 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 PPP1R1AQ13522 171 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 TMEM128Q5BJH2 165 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 Q6YL49 198 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 SPAG16Q8N0X2 631 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 ZDHHC16Q969W1 377 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 RITA1Q96K30 269 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 MARVELD1Q9BSK0 173 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 PRELID3BQ9Y3B1 194 aa19.55■□□□□ 0.72
SCN1B-201ENST00000262631 C3orf85A0A1B0GTC6 90 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 RNF212BA8MTL3 300 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 H3BUX3 64 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 APOA2P02652 100 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 OR5AC1P0C628 307 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 BRS3P32247 399 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 DHODHQ02127 395 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 WASHC3Q9Y3C0 194 aa19.54■□□□□ 0.72
SCN1B-201ENST00000262631 MC5RP33032 325 aa19.53■□□□□ 0.72
SCN1B-201ENST00000262631 IER3P46695 156 aa19.53■□□□□ 0.72
SCN1B-201ENST00000262631 ZNF585BQ52M93 769 aa19.53■□□□□ 0.72
SCN1B-201ENST00000262631 SGPP2Q8IWX5 399 aa19.53■□□□□ 0.72
SCN1B-201ENST00000262631 LIN7CQ9NUP9 197 aaKnown RBP19.53■□□□□ 0.72
SCN1B-201ENST00000262631 PRR13Q9NZ81 148 aa19.53■□□□□ 0.72
SCN1B-201ENST00000262631 PEX14O75381 377 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 CRYZL1O95825 349 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 VAMP1P23763 118 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 MECP2P51608 486 aaKnown RBP19.52■□□□□ 0.72
SCN1B-201ENST00000262631 HNF4GQ14541 408 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 AANATQ16613 207 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 RTL8BQ17RB0 113 aa19.52■□□□□ 0.72
SCN1B-201ENST00000262631 H0Y980 276 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 OR4E1P0C645 316 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 TAS2R31P59538 309 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 HES1Q14469 280 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 SLC9A3R2Q15599 337 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 PDPNQ86YL7 162 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 GLYATL2Q8WU03 294 aa19.52■□□□□ 0.71
SCN1B-201ENST00000262631 EAF1Q96JC9 268 aaPredicted RBP19.52■□□□□ 0.71
SCN1B-201ENST00000262631 NIPBLQ6KC79 2804 aaeCLIP19.51■□□□□ 0.71
SCN1B-201ENST00000262631 INMT-MINDY4F8WBC2 141 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 HOXA3O43365 443 aaPredicted RBP19.51■□□□□ 0.71
SCN1B-201ENST00000262631 FAM157CP0CG43 387 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 TAGLNQ01995 201 aaKnown RBP19.51■□□□□ 0.71
SCN1B-201ENST00000262631 EBI3Q14213 229 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 OR52B4Q8NGK2 314 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 GALNT14Q96FL9 552 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 ALX4Q9H161 411 aaPredicted RBP19.51■□□□□ 0.71
SCN1B-201ENST00000262631 TNFRSF19Q9NS68 423 aa19.51■□□□□ 0.71
SCN1B-201ENST00000262631 FAM106CPP0CH98 169 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 DHRS2Q13268 280 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 SCGB2A2Q13296 93 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 LY6EQ16553 131 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 C4orf46Q504U0 113 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 TMEM219Q86XT9 240 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 THNSL2Q86YJ6 484 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 OR4S2Q8NH73 311 aa19.5■□□□□ 0.71
SCN1B-201ENST00000262631 C9orf170A2RU37 121 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 RBFOX2O43251 390 aaKnown RBP eCLIP19.49■□□□□ 0.711e-6■■■■□ 22.2
SCN1B-201ENST00000262631 S1PR2O95136 353 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 MOSP00540 346 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 HLA-AP01891 365 aaKnown RBP19.49■□□□□ 0.71
SCN1B-201ENST00000262631 RRASP10301 218 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 CNTFRP26992 372 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 KIR2DS2P43631 304 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 UBE2MP61081 183 aaKnown RBP19.49■□□□□ 0.71
SCN1B-201ENST00000262631 SSMEM1Q8WWF3 244 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 FLYWCH2Q96CP2 140 aaKnown RBP19.49■□□□□ 0.71
SCN1B-201ENST00000262631 DUX5Q96PT3 197 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 SEC22CQ9BRL7 303 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 TMEM222Q9H0R3 208 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 TCF19Q9Y242 345 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 KCNIP3Q9Y2W7 256 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 SRRM4A7MD48 611 aaKnown RBP19.49■□□□□ 0.71
SCN1B-201ENST00000262631 SFT2D2O95562 160 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 IFNA2P01563 188 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 IGKV1-39P01597 117 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 IGKV1D-39P04432 117 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 UCP1P25874 307 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 LPAR6P43657 344 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 TMEM187Q14656 261 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 Q8N6K4 173 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 OR4C13Q8NGP0 309 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 OR2T10Q8NGZ9 312 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 LHFPL5Q8TAF8 219 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 CD300LFQ8TDQ1 290 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 ESM1Q9NQ30 184 aa19.49■□□□□ 0.71
SCN1B-201ENST00000262631 A0A0B4J293 547 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 SERPINE2P07093 398 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 TMEM11P17152 192 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 RAG2P55895 527 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 ANKRD55Q3KP44 614 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 TMEM177Q53S58 311 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 DHRS7BQ6IAN0 325 aaPredicted RBP19.48■□□□□ 0.71
SCN1B-201ENST00000262631 LYG2Q86SG7 212 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 VKORC1L1Q8N0U8 176 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 TCTEX1D1Q8N7M0 179 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 CASTOR1Q8WTX7 329 aa19.48■□□□□ 0.71
SCN1B-201ENST00000262631 A6NDX4 124 aa19.47■□□□□ 0.71
SCN1B-201ENST00000262631 F2RL1P55085 397 aa19.47■□□□□ 0.71
SCN1B-201ENST00000262631 RPS16P62249 146 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms