RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 REG1BP48304 166 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 THBS3P49746 956 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 LINC00205P59089 165 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 TMEM187Q14656 261 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 TGIF2LXQ8IUE1 241 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 CADM3Q8N126 398 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 OR8H3Q8N146 312 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 C12orf45Q8N5I9 185 aaPredicted RBP16.66■□□□□ 0.26
RTCA-201ENST00000260563 COQ8AQ8NI60 647 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 JMJD8Q96S16 334 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 SSX3Q99909 188 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 PRR13Q9NZ81 148 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 HOXA3O43365 443 aaPredicted RBP16.65■□□□□ 0.26
RTCA-201ENST00000260563 CT45A6P0DMU7 189 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 CT45A5P0DMU8 189 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 CT45A7P0DMV0 189 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 HILS1P60008 231 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 AANATQ16613 207 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 ANKRD55Q3KP44 614 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 GLYATL2Q8WU03 294 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 SSMEM1Q8WWF3 244 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 ADTRPQ96IZ2 230 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 TMEM222Q9H0R3 208 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 A0A0B4J2A0 478 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 IGHV1-3A0A0C4DH29 117 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 A0A1W2PPI3 338 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 BTBD17A6NE02 478 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 UCP1P25874 307 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 IER3P46695 156 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 TCTEX1D1Q8N7M0 179 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 UXS1Q8NBZ7 420 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 DDB2Q92466 427 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 MRPL20Q9BYC9 149 aaKnown RBP16.65■□□□□ 0.26
RTCA-201ENST00000260563 MED28Q9H204 178 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 SHPKQ9UHJ6 478 aa16.65■□□□□ 0.26
RTCA-201ENST00000260563 DNAJC9-AS1A6NH13 148 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 H3BUX3 64 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 IGHV4-59P01825 116 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 BRS3P32247 399 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 BCAP31P51572 246 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 DYNLT3P51808 116 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 RRAS2P62070 204 aaPredicted RBP16.64■□□□□ 0.25
RTCA-201ENST00000260563 OR2B11Q5JQS5 317 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 LIN54Q6MZP7 749 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 LIAT1Q6ZQX7 453 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 ZNF383Q8NA42 475 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 OR5R1Q8NH85 324 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 PRELID3BQ9Y3B1 194 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 POMT1Q9Y6A1 747 aa16.64■□□□□ 0.25
RTCA-201ENST00000260563 TIMM23O14925 209 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 BRWD1-AS2P59051 145 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 SRPXP78539 464 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 MOB3BQ86TA1 216 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 SPAG16Q8N0X2 631 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 LGI3Q8N145 548 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 TMEM86BQ8N661 226 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 NABP2Q9BQ15 211 aa16.63■□□□□ 0.25
RTCA-201ENST00000260563 FAM212BQ9NTI7 297 aaPredicted RBP16.63■□□□□ 0.25
RTCA-201ENST00000260563 RAMP3O60896 148 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 FCGR3BO75015 233 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 CDS2O95674 445 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 SERPINE2P07093 398 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 KIR2DS2P43631 304 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 LRTM2Q8N967 370 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 CD300LFQ8TDQ1 290 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 TMEM56Q96MV1 263 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 ESM1Q9NQ30 184 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 TNFRSF19Q9NS68 423 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 TMEM56-RWDD3S4R434 201 aa16.62■□□□□ 0.25
RTCA-201ENST00000260563 DBX1A6NMT0 343 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 RAB13P51153 203 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 ZNF585BQ52M93 769 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 ZNF695Q8IW36 515 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 LHFPL5Q8TAF8 219 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 CFHR4Q92496 578 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 DUX5Q96PT3 197 aa16.61■□□□□ 0.25
RTCA-201ENST00000260563 HMX3A6NHT5 357 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 RPA2P15927 270 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 TAGLNQ01995 201 aaKnown RBP16.6■□□□□ 0.25
RTCA-201ENST00000260563 FCN2Q15485 313 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 TMEM268Q5VZI3 342 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 SELENOHQ8IZQ5 122 aaKnown RBP16.6■□□□□ 0.25
RTCA-201ENST00000260563 OR5AN1Q8NGI8 311 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 VPREB3Q9UKI3 123 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 SETD2Q9BYW2 2564 aaPredicted RBP16.6■□□□□ 0.25
RTCA-201ENST00000260563 H0YJW9 148 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 CLDN34H7C241 214 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 RBFOX2O43251 390 aaKnown RBP eCLIP16.6■□□□□ 0.25
RTCA-201ENST00000260563 VENTXO95231 258 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 APOA2P02652 100 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 SULT1A3P0DMM9 295 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 SULT1A4P0DMN0 295 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 LPAR6P43657 344 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 HABP2Q14520 560 aaPredicted RBP16.6■□□□□ 0.25
RTCA-201ENST00000260563 LY6EQ16553 131 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 CHAC2Q8WUX2 184 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 RBPMSQ93062 196 aaKnown RBP16.6■□□□□ 0.25
RTCA-201ENST00000260563 IL22RA2Q969J5 263 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 SLC35D1Q9NTN3 355 aa16.6■□□□□ 0.25
RTCA-201ENST00000260563 TCF19Q9Y242 345 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms