RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 BEX4Q9NWD9 120 aaPredicted RBP16.96■□□□□ 0.3
PNKP-203ENST00000593946 IGHV2-70DA0A0C4DH43 119 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 IGLV1-47P01700 117 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 LPAR6P43657 344 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 CD300LFQ8TDQ1 290 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 CLEC7AQ9BXN2 247 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 COMMD9Q9P000 198 aa16.95■□□□□ 0.3
PNKP-203ENST00000593946 POLR3KQ9Y2Y1 108 aaPredicted RBP16.95■□□□□ 0.3
PNKP-203ENST00000593946 FOXH1O75593 365 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 THBS3P49746 956 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 LRRC37A5PQ49AS3 106 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 FAM71F2Q6NXP2 309 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 ZBTB8BQ8NAP8 495 aaPredicted RBP16.94■□□□□ 0.3
PNKP-203ENST00000593946 ST6GALNAC6Q969X2 333 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 ADTRPQ96IZ2 230 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 GSKIPQ9P0R6 139 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 PRELID3BQ9Y3B1 194 aa16.94■□□□□ 0.3
PNKP-203ENST00000593946 RBFOX2O43251 390 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■□ 23.3
PNKP-203ENST00000593946 PRTN3P24158 256 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 PSMB6P28072 239 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 ZNF816Q0VGE8 651 aaPredicted RBP16.93■□□□□ 0.3
PNKP-203ENST00000593946 CLEC12BQ2HXU8 276 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 BEND2Q8NDZ0 799 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 LSM10Q969L4 123 aaKnown RBP16.93■□□□□ 0.3
PNKP-203ENST00000593946 TMEM186Q96B77 213 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 KPTNQ9Y664 436 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 FASNP49327 2511 aaKnown RBP16.93■□□□□ 0.3
PNKP-203ENST00000593946 A0A0G2JRQ6 117 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 FAM157AC9JC47 383 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 TOR1AO14656 332 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 S1PR2O95136 353 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 MPC2O95563 127 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 IGKV1-5P01602 117 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 KIR2DS2P43631 304 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 PRRX1P54821 245 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 DEFB113Q30KQ7 82 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 ZNF383Q8NA42 475 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 GRPEL2Q8TAA5 225 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 SPIN2AQ99865 258 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 SPIN2BQ9BPZ2 258 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 UNKLQ9H9P5 680 aaKnown RBP16.93■□□□□ 0.3
PNKP-203ENST00000593946 MMP26Q9NRE1 261 aa16.93■□□□□ 0.3
PNKP-203ENST00000593946 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 FCGR3BO75015 233 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 SLC25A16P16260 332 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 PRB3Q04118 309 aaPredicted RBP16.92■□□□□ 0.3
PNKP-203ENST00000593946 HLA-DRB5Q30154 266 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 C11orf87Q6NUJ2 197 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 LRRC75A-AS1Q8N1F1 130 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 SIRT7Q9NRC8 400 aa16.92■□□□□ 0.3
PNKP-203ENST00000593946 CT45A6P0DMU7 189 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 CT45A5P0DMU8 189 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 CT45A7P0DMV0 189 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 COX7A1P24310 79 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 AKR1C2P52895 323 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 LAMTOR1Q6IAA8 161 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 PNKDQ8N490 385 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 C9orf62Q8N4C0 152 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 OR4D5Q8NGN0 318 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 OR13D1Q8NGV5 346 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 SIRPDQ9H106 197 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 PLEKHA2Q9HB19 425 aa16.91■□□□□ 0.3
PNKP-203ENST00000593946 HMSDA8MTL9 139 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 P0C879 139 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 SLC25A4P12235 298 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 SLC25A6P12236 298 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 IL3RAP26951 378 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 RAB32Q13637 225 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 OR11H6Q8NGC7 330 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 GPR146Q96CH1 333 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 HPRT1P00492 218 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 HCP5Q6MZN7 132 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 FAM219AQ8IW50 185 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 OR4P4Q8NGL7 312 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 OR4S2Q8NH73 311 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 RNASE11Q8TAA1 199 aaKnown RBP16.9■□□□□ 0.3
PNKP-203ENST00000593946 MBD6Q96DN6 1003 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
PNKP-203ENST00000593946 MRPL20Q9BYC9 149 aaKnown RBP16.9■□□□□ 0.3
PNKP-203ENST00000593946 HEXA-AS1Q9H8Q6 139 aa16.9■□□□□ 0.3
PNKP-203ENST00000593946 A0A1B0GU03 582 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 BUB1B-PAK6H3BSN5 160 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 ATG12O94817 140 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 KRASP01116 189 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 MMP9P14780 707 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 G6PCP35575 357 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 DIAPH2-AS1Q14236 149 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 THOC7Q6I9Y2 204 aaKnown RBP16.89■□□□□ 0.29
PNKP-203ENST00000593946 VMO1Q7Z5L0 202 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 THAP6Q8TBB0 222 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 RNF126Q9BV68 326 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 MBD2Q9UBB5 411 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 MMP24Q9Y5R2 645 aa16.89■□□□□ 0.29
PNKP-203ENST00000593946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.88■□□□□ 0.297e-7■■■■□ 24.2
PNKP-203ENST00000593946 H0YIZ8 118 aa16.88■□□□□ 0.29
PNKP-203ENST00000593946 MBPP02686 304 aaPredicted RBP16.88■□□□□ 0.29
PNKP-203ENST00000593946 IZUMO4Q1ZYL8 232 aa16.88■□□□□ 0.29
PNKP-203ENST00000593946 TMEM65Q6PI78 240 aa16.88■□□□□ 0.29
PNKP-203ENST00000593946 Q6ZRM9 215 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms