RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 THBS3P49746 956 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 DLX6P56179 175 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 TMEM33P57088 247 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 EIF5AP63241 154 aaKnown RBP23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 ZNF843Q8N446 348 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 NEIL1Q96FI4 390 aaPredicted RBP23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 S1PR3Q99500 378 aa23.91■■□□□ 1.42
CTDNEP1-208ENST00000573600 RPS10-NUDT3A0A1W2PQS6 291 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 KRASP01116 189 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 P0C879 139 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 G6PCP35575 357 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 OR2C3Q8N628 320 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 C8orf31Q8N9H6 132 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 MAGT1Q9H0U3 335 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 KIAA1324LA8MWY0 1029 aaPredicted RBP23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 FAM90A26D6RGX4 464 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 FCGR3BO75015 233 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 LY6HO94772 140 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 IZUMO4Q1ZYL8 232 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 ZNF251Q9BRH9 671 aa23.9■■□□□ 1.42
CTDNEP1-208ENST00000573600 A0A1W2PPH5 198 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 LINC00205P59089 165 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 BAP18Q8IXM2 172 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 DDB2Q92466 427 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 RAB40CQ96S21 281 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 SLC25A31Q9H0C2 315 aa23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 LYRM2Q9NU23 88 aaPredicted RBP23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 KLF2Q9Y5W3 355 aaPredicted RBP23.89■■□□□ 1.41
CTDNEP1-208ENST00000573600 TOR1AO14656 332 aa23.88■■□□□ 1.41
CTDNEP1-208ENST00000573600 CHST1O43916 411 aa23.88■■□□□ 1.41
CTDNEP1-208ENST00000573600 F12P00748 615 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 CDKN1AP38936 164 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 C1orf229Q6ZS94 237 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 H2BFWTQ7Z2G1 175 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 FBXL17Q9UF56 701 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 A0A087X0M5 115 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 A0A1B0GX30 115 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 GAPDHP04406 335 aaKnown RBP23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 ERVFRD-1P60508 538 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 LINC00311Q8N616 119 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 ZNF596Q8TC21 504 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 R3HDM4Q96D70 268 aa23.87■■□□□ 1.41
CTDNEP1-208ENST00000573600 LINC00862A6NCI5 91 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 MARCH11A6NNE9 402 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 NXPH3O95157 252 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 CAV2P51636 162 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 ARHGDIBP52566 201 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 WDR25Q64LD2 544 aaPredicted RBP23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 OR4S2Q8NH73 311 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 C8orf46Q8TAG6 207 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 SLC25A32Q9H2D1 315 aa23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.86■■□□□ 1.41
CTDNEP1-208ENST00000573600 SMG1Q96Q15 3661 aaKnown RBP23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 SYNGR2O43760 224 aa23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 JTBO76095 146 aa23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 RPL23AP62750 156 aaKnown RBP23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 EWSR1Q01844 656 aaKnown RBP eCLIP23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 MIDNQ504T8 468 aa23.85■■□□□ 1.41
CTDNEP1-208ENST00000573600 FAM24AA6NFZ4 105 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 FAM90A9PA6NNJ1 464 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 IGHV1-8P0DP01 117 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 EFNA4P52798 201 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 SESN1Q9Y6P5 492 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 DOCK11Q5JSL3 2073 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 S100A1P23297 94 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 ZNF833PQ6ZTB9 187 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 SPOCK3Q9BQ16 436 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 PATZ1Q9HBE1 687 aaKnown RBP23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 WSB1Q9Y6I7 421 aa23.84■■□□□ 1.41
CTDNEP1-208ENST00000573600 MED6O75586 246 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 RBP4P02753 201 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 NQO2P16083 231 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 TLE4Q04727 773 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 RPL7L1Q6DKI1 246 aaKnown RBP23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 TMEM252Q8N6L7 170 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 OR9G1Q8NH87 305 aa23.83■■□□□ 1.41
CTDNEP1-208ENST00000573600 J3QR06 171 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 C1QL1O75973 258 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 PAX9P55771 341 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 ERVK-16P61578 105 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 BAXQ07812 192 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 FAM71F2Q6NXP2 309 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 C11orf42Q8N5U0 333 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 ZNF383Q8NA42 475 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 SMIM3Q9BZL3 60 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 HSPB7Q9UBY9 170 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 EPG5Q9HCE0 2579 aa23.82■■□□□ 1.4
CTDNEP1-208ENST00000573600 PPIAL4CA0A0B4J2A2 164 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 IGSF23A1L1A6 192 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 TMEM50AO95807 157 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 NMBP08949 121 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 PPIAL4GP0DN37 164 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 GPR6P46095 362 aaPredicted RBP23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 TAS2R30P59541 319 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 NHLH2Q02577 135 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 CFAP46Q8IYW2 2715 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 BORCS7-ASMTA0A0B4J1R7 106 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 TNFRSF9Q07011 255 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 EIF5AL1Q6IS14 154 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 UBAC2Q8NBM4 344 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms