RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 FAM106CPP0CH98 169 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 SPNP16150 400 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 NFYAP23511 347 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-225ENST00000569245 CEACAM6P40199 344 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 BLCAPP62952 87 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 TRIM16LQ309B1 348 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 AADACL3Q5VUY0 350 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 CENPSQ8N2Z9 138 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 MRGPRFQ96AM1 343 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 MOB3AQ96BX8 217 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 OR2S2Q9NQN1 319 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 GFOD1Q9NXC2 390 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 OR1A1Q9P1Q5 309 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 NUBP2Q9Y5Y2 271 aa11.59□□□□□ -0.55
COMMD4-225ENST00000569245 OR5H14A6NHG9 310 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 ITGB1BP1O14713 200 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 YPEL1O60688 119 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 PPYP01298 95 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 AADACP22760 399 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 UCP3P55916 312 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 SURF2Q15527 256 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-225ENST00000569245 C2orf68Q2NKX9 166 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 C16orf82Q7Z2V1 217 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 OR52L2PQ8NGH6 319 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 SCGB3A2Q96PL1 93 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 YPEL2Q96QA6 119 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 SLC25A33Q9BSK2 321 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 RDH8Q9NYR8 311 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 OR2W1Q9Y3N9 320 aa11.58□□□□□ -0.56
COMMD4-225ENST00000569245 IGHV3-43A0A0B4J1X8 118 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 RGS11O94810 467 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 IGHV3-43DP0DP04 118 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 VDAC2P45880 294 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-225ENST00000569245 HERV-K104P61576 105 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 HES1Q14469 280 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 GNMTQ14749 295 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 Q3ZCU0 254 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 MORN2Q502X0 79 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 Q8N2B8 174 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 DRAM1Q8N682 238 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 MARVELD1Q9BSK0 173 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 FXYD6Q9H0Q3 95 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 SERTAD4Q9NUC0 356 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 GPR132Q9UNW8 380 aa11.57□□□□□ -0.56
COMMD4-225ENST00000569245 OR2F2O95006 317 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 PPP1CCP36873 323 aaKnown RBP11.56□□□□□ -0.56
COMMD4-225ENST00000569245 RAB7AP51149 207 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 MECP2P51608 486 aaKnown RBP11.56□□□□□ -0.56
COMMD4-225ENST00000569245 HNF4GQ14541 408 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 ABCA11PQ4W5N1 156 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 HIST2H2BDQ6DRA6 164 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 Q6ZS46 218 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 MOB3BQ86TA1 216 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 OR10V1Q8NGI7 309 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 FAM110DQ8TAY7 271 aaPredicted RBP11.56□□□□□ -0.56
COMMD4-225ENST00000569245 MARCH1Q8TCQ1 289 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 EDARADDQ8WWZ3 215 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
COMMD4-225ENST00000569245 C20orf85Q9H1P6 137 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
COMMD4-225ENST00000569245 VWFP04275 2813 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 IGKV1D-13A0A0B4J2D9 117 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 FBXO24O75426 580 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 TSPAN15O95858 294 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 GAPDHP04406 335 aaKnown RBP11.55□□□□□ -0.56
COMMD4-225ENST00000569245 SNRNP70P08621 437 aaKnown RBP11.55□□□□□ -0.56
COMMD4-225ENST00000569245 H2AFB2P0C5Z0 115 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 IGKV1-13P0DP09 117 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 IL3RAP26951 378 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 REG1BP48304 166 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-225ENST00000569245 DIAPH2-AS1Q14236 149 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 TMEM95Q3KNT9 176 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-225ENST00000569245 LPCAT3Q6P1A2 487 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 Q6ZNX1 250 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 SLC38A6Q8IZM9 456 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 OR8H3Q8N146 312 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 ZNF439Q8NDP4 499 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 ZFAND1Q8TCF1 268 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 PARP12Q9H0J9 701 aaKnown RBP11.55□□□□□ -0.56
COMMD4-225ENST00000569245 FLVCR2Q9UPI3 526 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 VSIG4Q9Y279 399 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 MEGF8Q7Z7M0 2845 aa11.55□□□□□ -0.56
COMMD4-225ENST00000569245 TRAV6A0A075B6T7 132 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 A0A1W2PPI3 338 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 INMT-MINDY4F8WBC2 141 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 M0QZK8 103 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 HSD17B6O14756 317 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
COMMD4-225ENST00000569245 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-225ENST00000569245 TMEM11P17152 192 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 FXYD4P59646 89 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 MSMO1Q15800 293 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms