RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 EBPQ15125 230 aaKnown RBP3.4□□□□□ -1.87
LINC00561-201ENST00000565815 MOGAT2Q3SYC2 334 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CBLN3Q6UW01 205 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SLC35D2Q76EJ3 337 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SLC16A14Q7RTX9 510 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 COX8CQ7Z4L0 72 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SGPP2Q8IWX5 399 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 OR13D1Q8NGV5 346 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 MARCH1Q8TCQ1 289 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 RNF138Q8WVD3 245 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 HIST1H2BAQ96A08 127 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM230Q96A57 120 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 FGGYQ96C11 551 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SLAMF6Q96DU3 332 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 GINS3Q9BRX5 216 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SELENOIQ9C0D9 397 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SIRT7Q9NRC8 400 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 SDHAF3Q9NRP4 125 aa3.4□□□□□ -1.87
LINC00561-201ENST00000565815 PHF3Q92576 2039 aaKnown RBP3.4□□□□□ -1.87
LINC00561-201ENST00000565815 PDZD2O15018 2839 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 DOCK10Q96BY6 2186 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 A0A087X0K7 114 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 A0A0U1RQV5 110 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 CRYM-AS1A6NIL9 109 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 FOXI3A8MTJ6 420 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 B4DEV8 164 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 C11orf98E9PRG8 122 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 PHF1O43189 567 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SGCEO43556 437 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZFAND5O76080 213 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 IGHV2-5P01817 119 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 IGHG1P01857 330 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 FBP1P09467 338 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 RPS2P15880 293 aaKnown RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SNCAP37840 140 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 PTGFRP43088 359 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 RAB2AP61019 212 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SSTP61278 116 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR8B8Q15620 311 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 GLIPR1L1Q6UWM5 242 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 C9orf40Q8IXQ3 194 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF101Q8IZC7 436 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM156Q8N614 296 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 LINC00469Q8N7U9 141 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR4S1Q8NGB4 309 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR51A2Q8NGJ7 313 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 WWTR1Q9GZV5 400 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZDHHC11Q9H8X9 412 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF391Q9UJN7 358 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 FREM2Q5SZK8 3169 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 EIF1BO60739 113 aaKnown RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 IGLV3-1P01715 115 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 PMP2P02689 132 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF14P17017 642 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 RAB5AP20339 215 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 EIF1P41567 113 aaKnown RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 LPAR6P43657 344 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 P2RY4P51582 365 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 POLR2GP62487 172 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 PLGLB1Q02325 96 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF266Q14584 549 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 CLINT1Q14677 625 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ACSF3Q4G176 576 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 BEX5Q5H9J7 111 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 Q6ZRG5 221 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 Q71RC1 249 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ANKRD37Q7Z713 158 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR5AS1Q8N127 324 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 CCDC71LQ8N9Z2 235 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 NOXO1Q8NFA2 376 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR10G4Q8NGN3 311 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR6X1Q8NH79 312 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 OR2T6Q8NHC8 308 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 DOK4Q8TEW6 326 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SLC25A36Q96CQ1 311 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 C1orf147Q96MC9 270 aaPredicted RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SPIN2AQ99865 258 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 GAL3ST1Q99999 423 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SPIN2BQ9BPZ2 258 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 MRPL13Q9BYD1 178 aaKnown RBP3.39□□□□□ -1.87
LINC00561-201ENST00000565815 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 SLC35B3Q9H1N7 401 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 FN3KRPQ9HA64 309 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 CALHM2Q9HA72 323 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 LAMA1P25391 3075 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 PKDREJQ9NTG1 2253 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
LINC00561-201ENST00000565815 CACNA1CQ13936 2221 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 FARS2O95363 451 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CDS2O95674 445 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms