RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CX3CL1P78423 397 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 ZNF616Q08AN1 781 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 MOGAT2Q3SYC2 334 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.32
USB1-211ENST00000565662 TNFAIP8O95379 198 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 OR8U9P0C7N5 309 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 CNTFRP26992 372 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 RAB9AP51151 201 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 RAB25P57735 213 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 DGCR2P98153 550 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 PSG5Q15238 335 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 CDNFQ49AH0 187 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 ACTBL2Q562R1 376 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 CNIH2Q6PI25 160 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
USB1-211ENST00000565662 RHBDL2Q9NX52 303 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 MRPS7Q9Y2R9 242 aaKnown RBP13.07□□□□□ -0.32
USB1-211ENST00000565662 PRELID3BQ9Y3B1 194 aa13.07□□□□□ -0.32
USB1-211ENST00000565662 A0A1W2PN81 502 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 GSTT2P0CG29 244 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 GSTT2BP0CG30 244 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 CHRNA7P36544 502 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 TMEM177Q53S58 311 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 IGSF11Q5DX21 431 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
USB1-211ENST00000565662 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
USB1-211ENST00000565662 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 ZNF383Q8NA42 475 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 OSR1Q8TAX0 266 aaPredicted RBP13.06□□□□□ -0.32
USB1-211ENST00000565662 BORCS5Q969J3 196 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 SDHAF2Q9NX18 166 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 WSB1Q9Y6I7 421 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 TGP01266 2768 aa13.06□□□□□ -0.32
USB1-211ENST00000565662 PRKDCP78527 4128 aaKnown RBP13.05□□□□□ -0.32
USB1-211ENST00000565662 A0A087WXM4 84 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 I3L521 148 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 IGKV1-16P04430 117 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 CBX5P45973 191 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 LUMP51884 338 aaPredicted RBP13.05□□□□□ -0.32
USB1-211ENST00000565662 MSMO1Q15800 293 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
USB1-211ENST00000565662 LOC100506127A0A0U1RQW1 187 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 G3V318 75 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 SHOXO15266 292 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 CNIH1O95406 144 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 BRI3O95415 125 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 CA2P00918 260 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
USB1-211ENST00000565662 SDC2P34741 201 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 UNQ5815/PRO19632Q6UWF5 114 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 TEX45Q8NA69 505 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 VSTM2AQ8TAG5 236 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 CYYR1Q96J86 154 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 RITA1Q96K30 269 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
USB1-211ENST00000565662 SEC14L6B5MCN3 397 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 SLC25A17O43808 307 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 ARPC4P59998 168 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 NDPQ00604 133 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 PLA2G7Q13093 441 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 FXYD3Q14802 87 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 NEDD8Q15843 81 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 C18orf65Q6ZTR6 163 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 ZNF429Q86V71 674 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 DRAXINQ8NBI3 349 aaPredicted RBP13.03□□□□□ -0.32
USB1-211ENST00000565662 OR1N2Q8NGR9 330 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 HSD17B10Q99714 261 aaKnown RBP13.03□□□□□ -0.32
USB1-211ENST00000565662 OR51E2Q9H255 320 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 ZNF230Q9UIE0 474 aaPredicted RBP13.03□□□□□ -0.32
USB1-211ENST00000565662 ANXA10Q9UJ72 324 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 SPATA2Q9UM82 520 aa13.03□□□□□ -0.32
USB1-211ENST00000565662 TMEM235A6NFC5 223 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 LINC01619G3V211 115 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 PROP1O75360 226 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 ACTL6BO94805 426 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 HLA-DQB1P01920 261 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.33
USB1-211ENST00000565662 AADACP22760 399 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 DUTP33316 252 aaKnown RBP13.02□□□□□ -0.33
USB1-211ENST00000565662 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 UBE2KP61086 200 aa13.02□□□□□ -0.33
USB1-211ENST00000565662 DEFB136Q30KP8 78 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms