RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MRPL48Q96GC5 212 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 HBEGFQ99075 208 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 MND1Q9BWT6 205 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 HINT2Q9BX68 163 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 MROQ9BYG7 248 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 DCSTAMPQ9H295 470 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 ACOT13Q9NPJ3 140 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TAS2R9Q9NYW1 312 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 VAX2Q9UIW0 290 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 RAB23Q9ULC3 237 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 SLC22A14Q9Y267 594 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TRAV8-4A0A0B4J246 113 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 FUOMA2VDF0 154 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 FAM25AB3EWG3 89 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 FAM25CB3EWG5 89 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 FAM25GB3EWG6 89 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 hCG_2039718K7EN88 272 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CCRL2O00421 344 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 SCN2BO60939 215 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 GADD45GO95257 159 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 BRI3O95415 125 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CPSF4O95639 269 aaKnown RBP2.59□□□□□ -1.99
LINC00560-201ENST00000564593 P01737 135 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CDK1P06493 297 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TRAPPC2P0DI81 140 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TRAPPC2BP0DI82 140 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 S100A1P23297 94 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TEAD1P28347 426 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CCR7P32248 378 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 IDH2P48735 452 aaKnown RBP2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TAS2R43P59537 309 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 DSTNP60981 165 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 PPP1CAP62136 330 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 SKP1P63208 163 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CDK6Q00534 326 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 EMX1Q04741 257 aaPredicted RBP2.59□□□□□ -1.99
LINC00560-201ENST00000564593 FUT5Q11128 374 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 IHHQ14623 411 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 KLHL12Q53G59 568 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 RPL13AP3Q6NVV1 102 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 COMMD6Q7Z4G1 85 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 MSRB3Q8IXL7 192 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 C17orf78Q8N4C9 275 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 SLC35G3Q8N808 338 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF565Q8N9K5 539 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 OR7G1Q8NGA0 311 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 OR6K2Q8NGY2 324 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TEX47Q8TBZ9 253 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 SFXN5Q8TD22 340 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 OR5P2Q8WZ92 322 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 S100PBPQ96BU1 408 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 RNF170Q96K19 258 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 GPR82Q96P67 336 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 IP6K3Q96PC2 410 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 CDCA4Q9BXL8 241 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 EBPLQ9BY08 206 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 ANGPTL4Q9BY76 406 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 NDEL1Q9GZM8 345 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 C6orf62Q9GZU0 229 aaPredicted RBP2.59□□□□□ -1.99
LINC00560-201ENST00000564593 DSN1Q9H410 356 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 PLEKHF2Q9H8W4 249 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 DIABLOQ9NR28 239 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 TAS2R5Q9NYW4 299 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 IL20Q9NYY1 176 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 SSR3Q9UNL2 185 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 ENPP4Q9Y6X5 453 aa2.59□□□□□ -1.99
LINC00560-201ENST00000564593 MUC22E2RYF6 1773 aaPredicted RBP2.59□□□□□ -2
LINC00560-201ENST00000564593 MDC1Q14676 2089 aaKnown RBP2.59□□□□□ -2
LINC00560-201ENST00000564593 GPR179Q6PRD1 2367 aa2.59□□□□□ -2
LINC00560-201ENST00000564593 GOLGA4Q13439 2230 aaKnown RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 IGHV2OR16-5A0A0B4J2B6 119 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 SLC5A10A0PJK1 596 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 E7EQ34 232 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 H7C2Y5 167 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 KPNA3O00505 521 aaPredicted RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 SNAPC5O75971 98 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 RAB36O95755 333 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 IMPA1P29218 277 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 IL12BP29460 328 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 GNRHRP30968 328 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 ETV6P41212 452 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 INPP1P49441 399 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 EIF2B2P49770 351 aaKnown RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 GZMMP51124 257 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 RAB25P57735 213 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 TAS2R60P59551 318 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 SNRPGP62308 76 aaKnown RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 RELAQ04206 551 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 C2orf80Q0P641 193 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 PDGFRLQ15198 375 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 TRAM1Q15629 374 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 KRTAP13-2Q52LG2 175 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 PYCR3Q53H96 274 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 XKRXQ6PP77 449 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 DEFB128Q7Z7B8 93 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 SELENOHQ8IZQ5 122 aaKnown RBP2.58□□□□□ -2
LINC00560-201ENST00000564593 CLDN22Q8N7P3 220 aa2.58□□□□□ -2
LINC00560-201ENST00000564593 CYB561A3Q8NBI2 242 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms