RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 M0R1X1 148 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 TMPRSS2O15393 492 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 FCN3O75636 299 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 PLAUP00749 431 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 CAMLGP49069 296 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 UBE2KP61086 200 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 DEFA5Q01523 94 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 TNFRSF9Q07011 255 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 OR2G3Q8NGZ4 309 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 LRRC46Q96FV0 321 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 ABHD14AQ9BUJ0 271 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 GFOD1Q9NXC2 390 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 MMP23AO75900 390 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 PRH1P02810 166 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 BTN1A1Q13410 526 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 TCTEX1D1Q8N7M0 179 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 TSNAXQ99598 290 aaKnown RBP15.79■□□□□ 0.12
SMPD3-203ENST00000563226 C19orf12Q9NSK7 152 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 HSPB7Q9UBY9 170 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 CHD8Q9HCK8 2581 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 LRRC30A6NM36 301 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 FCGR3BO75015 233 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 CT45A1Q5HYN5 189 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 CT45A3Q8NHU0 189 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 UQCC1Q9NVA1 299 aa15.78■□□□□ 0.12
SMPD3-203ENST00000563226 FAM90A26D6RGX4 464 aa15.77■□□□□ 0.12
SMPD3-203ENST00000563226 TMEM178BH3BS89 294 aa15.77■□□□□ 0.12
SMPD3-203ENST00000563226 NFYBP25208 207 aa15.77■□□□□ 0.12
SMPD3-203ENST00000563226 SPANXN5Q5MJ07 72 aa15.77■□□□□ 0.12
SMPD3-203ENST00000563226 CCL17Q92583 94 aa15.77■□□□□ 0.12
SMPD3-203ENST00000563226 NBASA2RRP1 2371 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 MARCH11A6NNE9 402 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 C9JQL5 133 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 RAB29O14966 203 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 NDUFB7P17568 137 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 ERVFRD-1P60508 538 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 ADORA2A-AS1P86434 159 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 H2BFWTQ7Z2G1 175 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 FAM213BQ8TBF2 198 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 EGLN1Q9GZT9 426 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 DYNLRB1Q9NP97 96 aa15.77■□□□□ 0.11
SMPD3-203ENST00000563226 NKX6-3A6NJ46 265 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 SIAH2O43255 324 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 CHRNB4P30926 498 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 RAB5CP51148 216 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 GUCA2BQ16661 112 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 PRAMEF5Q5TYX0 476 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 ZDHHC16Q969W1 377 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 R3HDM4Q96D70 268 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 RBMXL1Q96E39 390 aaKnown RBP15.76■□□□□ 0.11
SMPD3-203ENST00000563226 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.76■□□□□ 0.11
SMPD3-203ENST00000563226 STRAPQ9Y3F4 350 aaKnown RBP15.76■□□□□ 0.11
SMPD3-203ENST00000563226 NCOR2Q9Y618 2525 aa15.76■□□□□ 0.11
SMPD3-203ENST00000563226 TRAV38-1A0A0B4J264 116 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 A0A1B0GV50 99 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 VSTM5A8MXK1 200 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 RNASEK-C17orf49H0YIS7 233 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 ATG12O94817 140 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 TSPAN15O95858 294 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 CD3EP07766 207 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 M6PRP20645 277 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 TAS2R30P59541 319 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 SPINK9Q5DT21 86 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 ZNF439Q8NDP4 499 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 FAM216AQ8WUB2 273 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 TMEM106BQ9NUM4 274 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 IDI2-AS1Q9NZ38 188 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 PPIAL4EA0A075B759 164 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 SAA2-SAA4A0A096LPE2 208 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 PPIAL4DF5H284 164 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 F8W036 122 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 CD5P06127 495 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 OR9G9P0C7N8 305 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 SAA2P0DJI9 122 aaPredicted RBP15.75■□□□□ 0.11
SMPD3-203ENST00000563226 PPIAL4FP0DN26 164 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 GNG10P50151 68 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 ZNF273Q14593 569 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 FBXL19-AS1Q494R0 122 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 ZNF525Q8N782 197 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 CORO2AQ92828 525 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 SLC25A10Q9UBX3 287 aaPredicted RBP15.75■□□□□ 0.11
SMPD3-203ENST00000563226 PPIAL4AQ9Y536 164 aa15.75■□□□□ 0.11
SMPD3-203ENST00000563226 ZNF729A6NN14 1252 aaPredicted RBP15.74■□□□□ 0.11
SMPD3-203ENST00000563226 ZG16O60844 167 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 DFFBO76075 338 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 F12P00748 615 aaPredicted RBP15.74■□□□□ 0.11
SMPD3-203ENST00000563226 SNCAP37840 140 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 C10orf91Q5T1B1 145 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 LYPD2Q6UXB3 125 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 VKORC1L1Q8N0U8 176 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 OR4C12Q96R67 309 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 ZNF251Q9BRH9 671 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 SCRT1Q9BWW7 348 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 ZNRD1Q9P1U0 126 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 LAMP3Q9UQV4 416 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 FAM157AC9JC47 383 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 ITGB1BP1O14713 200 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 APOBEC3AP31941 199 aaPredicted RBP15.74■□□□□ 0.11
SMPD3-203ENST00000563226 RAB7AP51149 207 aa15.74■□□□□ 0.11
SMPD3-203ENST00000563226 OR2B8PP59922 312 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms