RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ABHD5Q8WTS1 349 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 MAFIPQ8WZ33 124 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 CLCC1Q96S66 551 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 FAM103A1Q9BTL3 118 aaKnown RBP10.47□□□□□ -0.73
USB1-205ENST00000561743 ALX4Q9H161 411 aaPredicted RBP10.47□□□□□ -0.73
USB1-205ENST00000561743 OR2D2Q9H210 308 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 TPSG1Q9NRR2 321 aa10.47□□□□□ -0.73
USB1-205ENST00000561743 ZNF230Q9UIE0 474 aaPredicted RBP10.47□□□□□ -0.73
USB1-205ENST00000561743 TRBV6-7A0A0A0MS04 114 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 SMIM30A4D0T7 59 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 DIRAS3O95661 229 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 CA2P00918 260 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 APOA2P02652 100 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 OR8U9P0C7N5 309 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 RPS16P62249 146 aaKnown RBP10.46□□□□□ -0.73
USB1-205ENST00000561743 DCTN2Q13561 401 aaKnown RBP10.46□□□□□ -0.73
USB1-205ENST00000561743 AKIRIN2Q53H80 203 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 VAX1Q5SQQ9 334 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 ZNF562Q6V9R5 426 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 PPP1R27Q86WC6 154 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 SPARTQ8N0X7 666 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 OR10J5Q8NHC4 309 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 C5orf30Q96GV9 206 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 PRR25Q96S07 402 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 TSNAXQ99598 290 aaKnown RBP10.46□□□□□ -0.73
USB1-205ENST00000561743 SDHAF2Q9NX18 166 aa10.46□□□□□ -0.73
USB1-205ENST00000561743 METTL21EPA6NDL7 271 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 SLC25A17O43808 307 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 IGLV2-23P01705 113 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 FGF9P31371 208 aaPredicted RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 ECI1P42126 302 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 SSBP2P81877 361 aaPredicted RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 TMEM267Q0VDI3 215 aaPredicted RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 ACTBL2Q562R1 376 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 PYHIN1Q6K0P9 492 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 UNQ5815/PRO19632Q6UWF5 114 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 DCUN1D4Q92564 292 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 SLC35D1Q9NTN3 355 aa10.45□□□□□ -0.74
USB1-205ENST00000561743 TXNL4BQ9NX01 149 aaKnown RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 ELF5Q9UKW6 265 aaPredicted RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
USB1-205ENST00000561743 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 ARPC1BO15143 372 aaKnown RBP10.44□□□□□ -0.74
USB1-205ENST00000561743 LGALS1P09382 135 aaKnown RBP10.44□□□□□ -0.74
USB1-205ENST00000561743 PSMB9P28065 219 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 SLURP1P55000 103 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 ARFRP1Q13795 201 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 SRSF7Q16629 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
USB1-205ENST00000561743 Q6ZS49 121 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 ARPC1AQ92747 370 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 ATG5Q9H1Y0 275 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.74
USB1-205ENST00000561743 STUB1Q9UNE7 303 aa10.44□□□□□ -0.74
USB1-205ENST00000561743 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 A0A087WW49 117 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 NOTOA8MTQ0 251 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 LINC01619G3V211 115 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 OVOL1O14753 267 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 CRYGBP07316 175 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 TALDO1P37837 337 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 INSL3P51460 131 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 TPPP2P59282 170 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 PJVKQ0ZLH3 352 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 FXYD3Q14802 87 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 H1FOOQ8IZA3 346 aaPredicted RBP10.43□□□□□ -0.74
USB1-205ENST00000561743 GRPEL2Q8TAA5 225 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 FCGR1BQ92637 280 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 DLX4Q92988 240 aaPredicted RBP10.43□□□□□ -0.74
USB1-205ENST00000561743 MS4A10Q96PG2 267 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 ZNF256Q9Y2P7 627 aaPredicted RBP10.43□□□□□ -0.74
USB1-205ENST00000561743 SORL1Q92673 2214 aa10.43□□□□□ -0.74
USB1-205ENST00000561743 IGHV3-11P01762 117 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 DTYMKP23919 212 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 LGALS7P47929 136 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 ARL6IP1Q15041 203 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 CDNFQ49AH0 187 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 TMEM177Q53S58 311 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 ZNF429Q86V71 674 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 TPRA1Q86W33 373 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 BVESQ8NE79 360 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 DDB2Q92466 427 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 HARBI1Q96MB7 349 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 YTHDF1Q9BYJ9 559 aaKnown RBP10.42□□□□□ -0.74
USB1-205ENST00000561743 Q9H521 79 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 SLA2Q9H6Q3 261 aa10.42□□□□□ -0.74
USB1-205ENST00000561743 RBM7Q9Y580 266 aaKnown RBP10.42□□□□□ -0.74
USB1-205ENST00000561743 SRRM4A7MD48 611 aaKnown RBP10.41□□□□□ -0.74
USB1-205ENST00000561743 DUTP33316 252 aaKnown RBP10.41□□□□□ -0.74
USB1-205ENST00000561743 TAGLNQ01995 201 aaKnown RBP10.41□□□□□ -0.74
USB1-205ENST00000561743 RTL8BQ17RB0 113 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 HACD4Q5VWC8 232 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 SFXN4Q6P4A7 337 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 ZNF773Q6PK81 442 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 RHOVQ96L33 236 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms