RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CEACAM18	A8MTB9	384 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	KIR3DP1	A8MWS1	328 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	C5orf58	C9J3I9	102 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SMKR1	H3BMG3	65 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	MANBA	O00462	879 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PDE6D	O43924	150 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TPST1	O60507	370 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	LYPLA1	O75608	230 aa	Predicted RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PDYN	P01213	254 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	C1QC	P02747	245 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	HPN	P05981	417 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	BPGM	P07738	259 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR9G9	P0C7N8	305 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR13C7	P0DN81	318 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	HSD17B1	P14061	328 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF250	P15622	560 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SELE	P16581	610 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SDC1	P18827	310 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PSMB1	P20618	241 aa	Known RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PTGDS	P41222	190 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SERPINB10	P48595	397 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ATP4B	P51164	291 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FOXA1	P55317	472 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	IFITM2	Q01629	132 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PAX8	Q06710	450 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FCN2	Q15485	313 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	GRK1	Q15835	563 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	CLEC12B	Q2HXU8	276 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF630	Q2M218	657 aa	Predicted RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PLPPR5	Q32ZL2	321 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	CNPY1	Q3B7I2	92 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TNFAIP8L3	Q5GJ75	292 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FAM120AOS	Q5T036	256 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMEM78	Q5T7P6	136 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FHL5	Q5TD97	284 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OTP	Q5XKR4	325 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	LEMD1	Q68G75	181 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	COMMD6	Q7Z4G1	85 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	IFNE	Q86WN2	208 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	BPIFB2	Q8N4F0	458 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	MORN4	Q8NDC4	146 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR6T1	Q8NGN1	323 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR10G9	Q8NGN4	311 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR9Q1	Q8NGQ5	310 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR1L8	Q8NGR8	309 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR8U1	Q8NH10	309 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR13C6P	Q8NH95	151 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FNDC8	Q8TC99	324 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF721	Q8TF20	911 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	AGAP11	Q8TF27	550 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SSC4D	Q8WTU2	575 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TCTEX1D2	Q8WW35	142 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ASB13	Q8WXK3	278 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	MRAP2	Q96G30	205 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	MAGEB18	Q96M61	343 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SCGB3A2	Q96PL1	93 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SORT1	Q99523	831 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SERPINI1	Q99574	410 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	DEFB126	Q9BYW3	111 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	DCSTAMP	Q9H295	470 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR51I1	Q9H343	314 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	RBKS	Q9H477	322 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZDHHC11	Q9H8X9	412 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	SH2D2A	Q9NP31	389 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	MEPE	Q9NQ76	525 aa	Predicted RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TAS2R16	Q9NYV7	291 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR1A1	Q9P1Q5	309 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	CES1P1	Q9UKY3	287 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	C14orf166	Q9Y224	244 aa	Known RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF835	Q9Y2P0	537 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	FBXO7	Q9Y3I1	522 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	LSM5	Q9Y4Y9	91 aa	Known RBP	3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	ANKRD12	Q6UB98	2062 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TEX15	Q9BXT5	2789 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	FBN2	P35556	2912 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CROCC	Q5TZA2	2017 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SCN3A	Q9NY46	2000 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGHV3OR16-10	A0A075B7F0	116 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431		A0A087WUJ7	227 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGHV2OR16-5	A0A0B4J2B6	119 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TEX48	A0A1B0GUV7	120 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ISPD	A4D126	451 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431		A6NDN8	102 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TRAPPC2L	H3BP13	241 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431		M0R1B8	84 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TNFRSF11B	O00300	401 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	NME4	O00746	187 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ORC5	O43913	435 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	MGRN1	O60291	552 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CCDC22	O60826	627 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	FOXH1	O75593	365 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR7C1	O76099	320 aa	Predicted RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SUPT7L	O94864	414 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SOX14	O95416	240 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	MRPL3	P09001	348 aa	Known RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SULT1A3	P0DMM9	295 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SULT1A4	P0DMN0	295 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CPM	P14384	443 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	GABRA1	P14867	456 aa		3.17	□□□□□ -1.9

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