RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GPR157Q5UAW9 335 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 LYG1Q8N1E2 194 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 ZNF680Q8NEM1 530 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 C8orf46Q8TAG6 207 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 PATZ1Q9HBE1 687 aaKnown RBP11.33□□□□□ -0.6
TPM1-215ENST00000558868 COA4Q9NYJ1 87 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 UBQLN2Q9UHD9 624 aa11.33□□□□□ -0.6
TPM1-215ENST00000558868 ABCA4P78363 2273 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 A0A087X0M5 115 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 A0A1B0GX30 115 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 OVOL3O00110 214 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 TAAR5O14804 337 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 SLC31A2O15432 143 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 MMP23AO75900 390 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 HPRT1P00492 218 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
TPM1-215ENST00000558868 GNG10P50151 68 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 DLX6P56179 175 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 VAMP2P63027 116 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
TPM1-215ENST00000558868 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
TPM1-215ENST00000558868 ID3Q02535 119 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 WDR25Q64LD2 544 aaPredicted RBP11.32□□□□□ -0.6
TPM1-215ENST00000558868 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 LEAP2Q969E1 77 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
TPM1-215ENST00000558868 SESN1Q9Y6P5 492 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 ADGRG4Q8IZF6 3080 aa11.32□□□□□ -0.6
TPM1-215ENST00000558868 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 LINC00473A8K010 186 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
TPM1-215ENST00000558868 GPR137BO60478 399 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 PITX3O75364 302 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 LY6HO94772 140 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 LIPFP07098 398 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
TPM1-215ENST00000558868 EPHA1P21709 976 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 IL3RAP26951 378 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 GNB2P62879 340 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
TPM1-215ENST00000558868 RPL39P5Q59GN2 51 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 NCR3LG1Q68D85 454 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
TPM1-215ENST00000558868 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 A0A1W2PPE3 182 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 RAMP3O60896 148 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 FCGR3BO75015 233 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 PROP1O75360 226 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 MED6O75586 246 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 S1PR2O95136 353 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 HKR1P10072 659 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 RRASP10301 218 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 RAB14P61106 215 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 ERVK-16P61578 105 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 OR2B11Q5JQS5 317 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 PHYHIPLQ96FC7 376 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 AIFM2Q9BRQ8 373 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 ZNF471Q9BX82 626 aaPredicted RBP11.3□□□□□ -0.6
TPM1-215ENST00000558868 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
TPM1-215ENST00000558868 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.3□□□□□ -0.6
TPM1-215ENST00000558868 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 J3QR06 171 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 TOR1AO14656 332 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 KRASP01116 189 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 COX6B1P14854 86 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 NQO2P16083 231 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 PDLIM4P50479 330 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 PRRX1P54821 245 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 RPL23AP62750 156 aaKnown RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 EXOSC2Q13868 293 aaKnown RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 DHRS7BQ6IAN0 325 aaPredicted RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 ZNF833PQ6ZTB9 187 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 ODF3L1Q8IXM7 274 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 DDB2Q92466 427 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 TMEM186Q96B77 213 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 R3HDM4Q96D70 268 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 CCL19Q99731 98 aa11.29□□□□□ -0.6
TPM1-215ENST00000558868 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms