RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SCGB1D4Q6XE38 83 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 NAA40Q86UY6 237 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 NT5DC3Q86UY8 548 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 NIT1Q86X76 327 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ARIH2OSQ8N7S6 290 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 SLC35G3Q8N808 338 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZIC4Q8N9L1 334 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF555Q8NEP9 628 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 OR1M1Q8NGA1 313 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 OR1P1Q8NH06 330 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 FAM57AQ8TBR7 257 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 TNFAIP8L1Q8WVP5 186 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 TMBIM1Q969X1 311 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 TMA16Q96EY4 203 aaKnown RBP2.84□□□□□ -1.95
SCAF11-210ENST00000547654 PRAP1Q96NZ9 151 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 OLFM3Q96PB7 478 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 DOK1Q99704 481 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF436Q9C0F3 470 aaPredicted RBP2.84□□□□□ -1.95
SCAF11-210ENST00000547654 UBQLN4Q9NRR5 601 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 VPS29Q9UBQ0 182 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 STOML2Q9UJZ1 356 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
SCAF11-210ENST00000547654 FBN3Q75N90 2809 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 PIKFYVEQ9Y2I7 2098 aa2.84□□□□□ -1.95
SCAF11-210ENST00000547654 LRRC37AA6NMS7 1700 aa2.84□□□□□ -1.96
SCAF11-210ENST00000547654 TONSLQ96HA7 1378 aa2.84□□□□□ -1.96
SCAF11-210ENST00000547654 PRRC2BQ5JSZ5 2229 aaKnown RBP2.84□□□□□ -1.96
SCAF11-210ENST00000547654 TMX2-CTNND1H3BSU7 103 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 COPEO14579 308 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF861PO60384 105 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 IGLV3-25P01717 112 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 HLA-DRAP01903 254 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 OR4A8P0C604 315 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 GABRA1P14867 456 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 IL1RNP18510 177 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 MIPP30301 263 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 HPCAP84074 193 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 RSU1Q15404 277 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 SPATA31B1PQ5VZV4 182 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 CLEC20AQ6ZU45 233 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 ZBTB8OSQ8IWT0 167 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 C15orf56Q8N910 161 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 GPR32P1Q8NGA4 272 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 OR9A2Q8NGT5 310 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 CEP19Q96LK0 163 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 RTBDNQ9BSG5 229 aaPredicted RBP2.83□□□□□ -1.96
SCAF11-210ENST00000547654 MARVELD1Q9BSK0 173 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 NDFIP1Q9BT67 221 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 PECRQ9BY49 303 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 EIF5A2Q9GZV4 153 aaKnown RBP2.83□□□□□ -1.96
SCAF11-210ENST00000547654 ZSCAN16Q9H4T2 348 aaPredicted RBP2.83□□□□□ -1.96
SCAF11-210ENST00000547654 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 LHX9Q9NQ69 397 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 CA10Q9NS85 328 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 OPN4Q9UHM6 478 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 EP300Q09472 2414 aaPredicted RBP2.83□□□□□ -1.96
SCAF11-210ENST00000547654 ABCA12Q86UK0 2595 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 FREM2Q5SZK8 3169 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 CEP295Q9C0D2 2601 aa2.83□□□□□ -1.96
SCAF11-210ENST00000547654 C2orf16Q68DN1 1984 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 CENPVL3A0A0U1RRI6 287 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 E5RI56 91 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF189O75820 626 aaPredicted RBP2.82□□□□□ -1.96
SCAF11-210ENST00000547654 HLA-DQB1P01920 261 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 IL6P05231 212 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF823P16415 610 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 CXCL3P19876 107 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 CXCL12P48061 93 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 SERPINB9P50453 376 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 B2MP61769 119 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 BTN1A1Q13410 526 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 BATFQ16520 125 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 GUK1Q16774 197 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 LRRC75BQ2VPJ9 315 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 LINC00303Q3SY05 128 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 N4BP2L1Q5TBK1 243 aaPredicted RBP2.82□□□□□ -1.96
SCAF11-210ENST00000547654 ZFP1Q6P2D0 407 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 FAM131AQ6UXB0 335 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 NTM-AS1Q6ZSK4 140 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 DOLPP1Q86YN1 238 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 NATD1Q8N6N6 113 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 OR8A1Q8NGG7 326 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 C2orf15Q8WU43 125 aaKnown RBP2.82□□□□□ -1.96
SCAF11-210ENST00000547654 ASB17Q8WXJ9 295 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 DERL3Q96Q80 235 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 THTPAQ9BU02 230 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 CENPHQ9H3R5 247 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 C21orf62Q9NYP8 219 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 NEU3Q9UQ49 428 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 HDGFL3Q9Y3E1 203 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 MYO9AB2RTY4 2548 aa2.82□□□□□ -1.96
SCAF11-210ENST00000547654 DMXL2Q8TDJ6 3036 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 A0A096LNJ9 63 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 C5orf49A4QMS7 147 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 EVPLLA8MZ36 301 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms