RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 FAM3AP98173 230 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 FOXC1Q12948 553 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 ODF1Q14990 250 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 TMEM217Q8N7C4 229 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 ST6GALNAC6Q969X2 333 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 C1orf123Q9NWV4 160 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 SS18L2Q9UHA2 77 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 ANXA10Q9UJ72 324 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 TRAPPC2LQ9UL33 140 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 PPP1R3CQ9UQK1 317 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 INTS1Q8N201 2190 aaKnown RBP8.43□□□□□ -1.06
USP35-201ENST00000526425 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 SYNGR3O43761 229 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 JTBO76095 146 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 ZNF735P0CB33 412 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 PF4V1P10720 104 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 CSRP1P21291 193 aaKnown RBP8.43□□□□□ -1.06
USP35-201ENST00000526425 CCKARP32238 428 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 CKS1BP61024 79 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 RAB31Q13636 194 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 OR2G3Q8NGZ4 309 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 WASHC3Q9Y3C0 194 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
USP35-201ENST00000526425 CD300LBA8K4G0 201 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 K7EP13 123 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 PPBPP02775 128 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 PET100P0DJ07 73 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 B3GALT5-AS1P59052 145 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 RND3P61587 244 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 ANKRD55Q3KP44 614 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 TMEM56Q96MV1 263 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 TMEM56-RWDD3S4R434 201 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 H7BYZ3 331 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 SYNGR1O43759 233 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 SFT2D2O95562 160 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 MELTFP08582 738 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 NTF3P20783 257 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 GCH1P30793 250 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
USP35-201ENST00000526425 TESK1Q15569 626 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 C1orf122Q6ZSJ8 110 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 MDP1Q86V88 176 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 MRPL24Q96A35 216 aaKnown RBP8.42□□□□□ -1.06
USP35-201ENST00000526425 APOBEC3DQ96AK3 386 aaPredicted RBP8.42□□□□□ -1.06
USP35-201ENST00000526425 SLC45A2Q9UMX9 530 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 H3BP45 60 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 TIMM8AO60220 97 aaPredicted RBP8.42□□□□□ -1.06
USP35-201ENST00000526425 IGHV3-13P01766 116 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 IGHV3-7P01780 117 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 EDDM3AQ14507 147 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 FDCSPQ8NFU4 85 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 PTX4Q96A99 478 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 OR10C1Q96KK4 312 aa8.42□□□□□ -1.06
USP35-201ENST00000526425 TLN1Q9Y490 2541 aaKnown RBP8.41□□□□□ -1.06
USP35-201ENST00000526425 TOX4O94842 621 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 TBC1D28Q2M2D7 210 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 RSPO1Q2MKA7 263 aaPredicted RBP8.41□□□□□ -1.06
USP35-201ENST00000526425 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 HSPB7Q9UBY9 170 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 IGKV1-27A0A075B6S5 117 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 DEGS1O15121 323 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 WDR1O75083 606 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 PDCD6O75340 191 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 PMCHP20382 165 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 CDKN1AP38936 164 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 RANP62826 216 aaKnown RBP8.41□□□□□ -1.06
USP35-201ENST00000526425 HOGA1Q86XE5 327 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 CMTM2Q8TAZ6 248 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 PLA2G2EQ9NZK7 142 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 POMT1Q9Y6A1 747 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 TRDCB7Z8K6 153 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 F8VVB4 439 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 F8VWA3 439 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 DNPH1O43598 174 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 DKK1O94907 266 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 SERPINE2P07093 398 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 HERV-K104P63124 156 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 RTP5Q14D33 572 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 LYZL2Q7Z4W2 148 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
USP35-201ENST00000526425 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 THYN1Q9P016 225 aa8.41□□□□□ -1.06
USP35-201ENST00000526425 TRAV17A0A0B4J275 112 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 OR2T8A6NH00 312 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 CEBPZOSA8MTT3 80 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 TUSC2O75896 110 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 HAND1O96004 215 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 CELA3BP08861 270 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 AADACP22760 399 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 ARR3P36575 388 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 LHX2P50458 406 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 PRSS54Q6PEW0 395 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 ZADH2Q8N4Q0 377 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.06
USP35-201ENST00000526425 GPR132Q9UNW8 380 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms