RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 C7orf50Q9BRJ6 194 aaKnown RBP3.77□□□□□ -1.81
SDCBP-207ENST00000520168 FGF23Q9GZV9 251 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-207ENST00000520168 ABCG5Q9H222 651 aa3.77□□□□□ -1.81
SDCBP-207ENST00000520168 PPP1R3EQ9H7J1 279 aa3.77□□□□□ -1.81
SDCBP-207ENST00000520168 TUBA4BQ9H853 241 aa3.77□□□□□ -1.81
SDCBP-207ENST00000520168 MRM2Q9UI43 246 aaKnown RBP3.77□□□□□ -1.81
SDCBP-207ENST00000520168 KLK5Q9Y337 293 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-207ENST00000520168 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 C13orf42A0A1B0GVH6 325 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 A0A1W2PPQ1 181 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TVP23AA6NH52 213 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 NCBP2LA6PVI3 153 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 C12orf77C9JDV5 145 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 LINC01619G3V211 115 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 H0Y980 276 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 H3BSH0 61 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 J3QRK9 145 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 NDUFS6O75380 124 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 UPK1BO75841 260 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 NRASP01111 189 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 IGKV1D-33P01593 117 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 IGKV1-33P01594 117 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 IGF1P05019 195 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 H2BFMP0C1H6 154 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 LINC00614P0C842 121 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 OCM2P0CE71 109 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ARSBP15848 533 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 CDK2P24941 298 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 RPS19P39019 145 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 EIF2B2P49770 351 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 DEFA1P59665 94 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 DEFA3P59666 94 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ZP1P60852 638 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 RPS7P62081 194 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 MADCAM1Q13477 382 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 EBI3Q14213 229 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 EDDM3AQ14507 147 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 GRK1Q15835 563 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM41BQ5BJD5 291 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ZNF684Q5T5D7 378 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ASPHD1Q5U4P2 390 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 LIPKQ5VXJ0 399 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 RBPMS2Q6ZRY4 209 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 LINC00336Q6ZUF6 198 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 CENPSQ8N2Z9 138 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 RPP25LQ8N5L8 163 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 MS4A15Q8N5U1 240 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 OR4D10Q8NGI6 311 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 OR9G1Q8NH87 305 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TRMT10AQ8TBZ6 339 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ACOT12Q8WYK0 555 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 PHYHIPQ92561 330 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 DCUN1D4Q92564 292 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TMEM106AQ96A25 262 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 SLC25A46Q96AG3 418 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 OTULINQ96BN8 352 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TCEAL7Q9BRU2 100 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 ALKBH7Q9BT30 221 aaPredicted RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 CCDC32Q9BV29 185 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 MROQ9BYG7 248 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 HIPK2Q9H2X6 1198 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 PLEKHA1Q9HB21 404 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 EXOSC4Q9NPD3 245 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 TXNL4BQ9NX01 149 aaKnown RBP3.76□□□□□ -1.81
SDCBP-207ENST00000520168 CLEC5AQ9NY25 188 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 PRELID3BQ9Y3B1 194 aa3.76□□□□□ -1.81
SDCBP-207ENST00000520168 DNAH2Q9P225 4427 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 A0A1W2PPI3 338 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 PQLC2LA1A4F0 135 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 CCDC182A6NF36 153 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 FAM183AA6NL82 134 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 MARCH11A6NNE9 402 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 DHRS7CA6NNS2 312 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 SLC31A2O15432 143 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 OGG1O15527 345 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 CDRT1O95170 752 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 RLN1P04808 185 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 PSKH1P11801 424 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 CELP19835 753 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 RAB3AP20336 220 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 SLC2A5P22732 501 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 GABRR1P24046 479 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 PYCR1P32322 319 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 TNFSF8P32971 234 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 SDC2P34741 201 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 TGFBR1P36897 503 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 PTGFRP43088 359 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 MFAP4P55083 255 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 UBE2G2P60604 165 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 ERVK11-1P61568 191 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 RAB11AP62491 216 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 CRMP1Q14194 572 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 RBM39Q14498 530 aaKnown RBP3.75□□□□□ -1.81
SDCBP-207ENST00000520168 HNF4GQ14541 408 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 OXA1LQ15070 435 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 VAMP3Q15836 100 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 RAB11BQ15907 218 aa3.75□□□□□ -1.81
SDCBP-207ENST00000520168 SPIN3Q5JUX0 258 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms