RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 NCF1CA8MVU1 366 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SEC14L6B5MCN3 397 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 C9JQL5 133 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TMEM250H0YL14 139 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TXNDC9O14530 226 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 COX7A2LO14548 114 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CDIPTO14735 213 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 NCR3O14931 201 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 AZIN1O14977 448 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CRXO43186 299 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CHMP2AO43633 222 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 OR1I1O60431 355 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 MPZL2O60487 215 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 NOL3O60936 208 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 AGTP01019 485 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 IGHV1-69P01742 117 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 MBP02144 154 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ATP5G1P05496 136 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CD2P06729 351 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RPSAP08865 295 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 IGHV3-30-3P0DP02 117 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 NQO1P15559 274 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 HIST1H1CP16403 213 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 BGNP21810 368 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 PRTN3P24158 256 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CDK2P24941 298 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 IVDP26440 423 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 HMOX2P30519 316 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 OR10J1P30954 320 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 HOXA6P31267 233 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RRM2P31350 389 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 HSPA9P38646 679 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SSR2P43308 183 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 MAP2K4P45985 399 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GCLMP48507 274 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SULT1E1P49888 294 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CLDN8P56748 225 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RAB14P61106 215 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 FGF12P61328 243 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SPAG1Q07617 926 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 PDK2Q15119 407 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 PPP1R7Q15435 360 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TRAM1Q15629 374 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TMEM249Q2WGJ8 235 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 KRTAP21-3Q3LHN1 58 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SPIN4Q56A73 249 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CENPWQ5EE01 88 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TPRG1LQ5T0D9 272 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ZFAND6Q6FIF0 208 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 OR10K2Q6IF99 312 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RWDD4Q6NW29 188 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ZNF705AQ6ZN79 300 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CCDC121Q6ZUS5 278 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 FAM183BPQ6ZVS7 135 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 AHSA2Q719I0 299 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 Q86TA4 180 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GPHB5Q86YW7 130 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ZNF321PQ8N8H1 164 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GPATCH11Q8N954 259 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 NECAB1Q8N987 351 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 PROKR2Q8NFJ6 384 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RAB2BQ8WUD1 216 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 EEF1AKMT1Q8WVE0 214 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RASD2Q96D21 266 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GLT1D1Q96MS3 346 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TMEM56Q96MV1 263 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 FAM210AQ96ND0 272 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 OPALINQ96PE5 141 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GSDMAQ96QA5 445 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 AMELYQ99218 206 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 VAT1Q99536 393 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CHP1Q99653 195 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 EBNA1BP2Q99848 306 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SLC50A1Q9BRV3 221 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SUCNR1Q9BXA5 334 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 BBS2Q9BXC9 721 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 MED28Q9H204 178 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 GAL3ST2Q9H3Q3 398 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SMDT1Q9H4I9 107 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ARMC7Q9H6L4 198 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 RMND1Q9NWS8 449 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 SDHAF2Q9NX18 166 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CMTM6Q9NX76 183 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 TAS2R7Q9NYW3 318 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 MRM2Q9UI43 246 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 KIF3AQ9Y496 699 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CADP27708 2225 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ZGRF1Q86YA3 2104 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 ALMS1Q8TCU4 4167 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CSMD3Q7Z407 3707 aa-0.28□□□□□ -2.45
RNU6-1049P-201ENST00000516414 CHD6Q8TD26 2715 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 AHCTF1Q8WYP5 2266 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 BCL9O00512 1426 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 LPAP08519 4548 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 FAT2Q9NYQ8 4349 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 COL6A3P12111 3177 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 TRAV7A0A075B6U4 112 aa-0.29□□□□□ -2.46
RNU6-1049P-201ENST00000516414 A0A087WUU8 490 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms