RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CRYGBP07316 175 aa15.23■□□□□ 0.03
SQSTM1-215ENST00000514093 KIR2DS2P43631 304 aa15.23■□□□□ 0.03
SQSTM1-215ENST00000514093 APH1BQ8WW43 257 aa15.23■□□□□ 0.03
SQSTM1-215ENST00000514093 PHB2Q99623 299 aa15.23■□□□□ 0.03
SQSTM1-215ENST00000514093 MSGN1A6NI15 193 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 ITGB1BP1O14713 200 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 NAPSAO96009 420 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 FOLR2P14207 255 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 YIF1BQ5BJH7 314 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 ZNF880Q6PDB4 577 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 CBR4Q8N4T8 237 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 PYDC1Q8WXC3 89 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 GGTLC1Q9BX51 225 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 AKIP1Q9NQ31 210 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 ZC4H2Q9NQZ6 224 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 SLC35D1Q9NTN3 355 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 CLEC2DQ9UHP7 191 aa15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 ZNF230Q9UIE0 474 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-215ENST00000514093 C2orf70A6NJV1 201 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 HLA-AP01891 365 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 ZBTB25P24278 435 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 HTR2CP28335 458 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 RHOGP84095 191 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 EXOSC2Q13868 293 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 CDH26Q8IXH8 852 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 ADAD2Q8NCV1 583 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 EDARADDQ8WWZ3 215 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 PGLYRP3Q96LB9 341 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 NICN1Q9BSH3 213 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 HDHD3Q9BSH5 251 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 ZNF221Q9UK13 617 aa15.21■□□□□ 0.03
SQSTM1-215ENST00000514093 LOC102724200A0A096LPH7 203 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 PNMA8CA0A1B0GUJ8 204 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 PPP5D1E7EU14 171 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 M0R1X1 148 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 DYNC1I1O14576 645 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 ATP5G2Q06055 141 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 SLC16A13Q7RTY0 426 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 LYG2Q86SG7 212 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 CACNG8Q8WXS5 425 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 KLK5Q9Y337 293 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 VPS13DQ5THJ4 4388 aa15.2■□□□□ 0.02
SQSTM1-215ENST00000514093 SCTP09683 121 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 ZNF45Q02386 682 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 MRGPRG-AS1Q2M3A8 158 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 KCNG3Q8TAE7 436 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 HARBI1Q96MB7 349 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 DERL3Q96Q80 235 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 KCNK15Q9H427 330 aa15.19■□□□□ 0.02
SQSTM1-215ENST00000514093 LOC100130705A0A1B0GUX0 176 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 SRRM4A7MD48 611 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 OR9G9P0C7N8 305 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 DCKP27707 260 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 RPS27AP62979 156 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 OR52B4Q8NGK2 314 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 PTX4Q96A99 478 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 SLC29A1Q99808 456 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 UQCC2Q9BRT2 126 aa15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 TECRQ9NZ01 308 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-215ENST00000514093 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 MPPED1O15442 326 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 WBP4O75554 376 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 OR2C1O95371 312 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 HLA-DRB3P79483 266 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 TNFRSF9Q07011 255 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 TNXAQ16473 311 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 MOB1BQ7L9L4 216 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 TMEM61Q8N0U2 210 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 THRSPQ92748 146 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 GHRLQ9UBU3 117 aa15.17■□□□□ 0.02
SQSTM1-215ENST00000514093 SHOXO15266 292 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 TUSC2O75896 110 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 SCAF4O95104 1147 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 NKAIN3Q8N8D7 197 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 TMEM59Q9BXS4 323 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 PLEKHJ1Q9NW61 149 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 AK3Q9UIJ7 227 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 DMRT1Q9Y5R6 373 aa15.16■□□□□ 0.02
SQSTM1-215ENST00000514093 A0A0A6YYD4 124 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 IGKV1-6A0A0C4DH72 117 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 FAM223BA6NKX1 122 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 NDUFB8O95169 186 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 MYL12AP19105 171 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 CBLN1P23435 193 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 LGALS9CQ6DKI2 356 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 IDO2Q6ZQW0 420 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 WFDC3Q8IUB2 231 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 FAM223AQ8IWN6 122 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 SRSF12Q8WXF0 261 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 RDH8Q9NYR8 311 aa15.15■□□□□ 0.02
SQSTM1-215ENST00000514093 TRBV9A0A0B4J1U6 114 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 SPRY2O43597 315 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 OR2J3O76001 311 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 UNC119Q13432 240 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 DEFB135Q30KP9 77 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 ZNF57Q68EA5 555 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 ACOT12Q8WYK0 555 aa15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 MLXQ9UH92 298 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms