RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, human

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-218	ENST00000493456	FAM53C	Q9NYF3	392 aa		13.33	□□□□□ -0.28
NUP50-218	ENST00000493456	COA4	Q9NYJ1	87 aa		13.33	□□□□□ -0.28
NUP50-218	ENST00000493456	ZNF221	Q9UK13	617 aa		13.33	□□□□□ -0.28
NUP50-218	ENST00000493456	MGAT4A	Q9UM21	535 aa		13.33	□□□□□ -0.28
NUP50-218	ENST00000493456	TRBV6-6	A0A0A6YYG2	114 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	NUPR2	A6NF83	97 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	ZNF785	A8K8V0	405 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	PROP1	O75360	226 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	WBP4	O75554	376 aa	Known RBP	13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	TAS2R43	P59537	309 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	HLA-DRB3	P79483	266 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	ZFP1	Q6P2D0	407 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	ZFP41	Q8N8Y5	198 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	DYNLRB2	Q8TF09	96 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	C9orf16	Q9BUW7	83 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	TMEM59	Q9BXS4	323 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	WFDC10A	Q9H1F0	79 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	OR1A1	Q9P1Q5	309 aa		13.32	□□□□□ -0.28
NUP50-218	ENST00000493456	DYNC1I1	O14576	645 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	IGLV2-23	P01705	113 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	CRYGB	P07316	175 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	MAPK3	P27361	379 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	PJVK	Q0ZLH3	352 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	ZC4H2	Q9NQZ6	224 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	SLC35D1	Q9NTN3	355 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	CLEC2D	Q9UHP7	191 aa		13.31	□□□□□ -0.28
NUP50-218	ENST00000493456	CXorf65	A6NEN9	183 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	FAM223B	A6NKX1	122 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	BMPR1B	O00238	502 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	LINC00205	P59089	165 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	FAM223A	Q8IWN6	122 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	ZNF485	Q8NCK3	441 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	ADAD2	Q8NCV1	583 aa	Known RBP	13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	HARBI1	Q96MB7	349 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	PHB2	Q99623	299 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	TM2D1	Q9BX74	207 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	PLEKHJ1	Q9NW61	149 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	TECR	Q9NZ01	308 aa	Known RBP	13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	RYR1	P21817	5038 aa		13.3	□□□□□ -0.28
NUP50-218	ENST00000493456	OR9G9	P0C7N8	305 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	HTR2C	P28335	458 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	CBX3	Q13185	183 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	EXOSC2	Q13868	293 aa	Known RBP	13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	GUCA2B	Q16661	112 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	DEFB114	Q30KQ6	69 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	FAM209B	Q5JX69	171 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	OR10K2	Q6IF99	312 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	SLC16A13	Q7RTY0	426 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	KCNG3	Q8TAE7	436 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	TMEM80	Q96HE8	168 aa		13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP50-218	ENST00000493456	PNMA8C	A0A1B0GUJ8	204 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456		M0R1X1	148 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	RBMXL2	O75526	392 aa	Known RBP	13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	TUSC2	O75896	110 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	CD1A	P06126	327 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	KIR2DS2	P43631	304 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	PMS2P11	Q13670	270 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	KCTD12	Q96CX2	325 aa	Known RBP	13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	OVOL2	Q9BRP0	275 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	NICN1	Q9BSH3	213 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	GGTLC1	Q9BX51	225 aa		13.28	□□□□□ -0.28
NUP50-218	ENST00000493456	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	MSGN1	A6NI15	193 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	APELA	P0DMC3	54 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	RHOG	P84095	191 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	TAGLN	Q01995	201 aa	Known RBP	13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	ATP5G2	Q06055	141 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	UNC119	Q13432	240 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	TTC23	Q5W5X9	447 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	GLT8D1	Q68CQ7	371 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	AKIP1	Q9NQ31	210 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	AK3	Q9UIJ7	227 aa		13.27	□□□□□ -0.29
NUP50-218	ENST00000493456	TRBV9	A0A0B4J1U6	114 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	C2orf70	A6NJV1	201 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	SHOX	O15266	292 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	MPPED1	O15442	326 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	NDUFB8	O95169	186 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	SCT	P09683	121 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	FOLR2	P14207	255 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	CEL	P19835	753 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	TMEM177	Q53S58	311 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	C1orf100	Q5SVJ3	147 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	ZNF555	Q8NEP9	628 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	WDR89	Q96FK6	387 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP50-218	ENST00000493456		Q9N2K0	584 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	C12orf4	Q9NQ89	552 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	RDH8	Q9NYR8	311 aa		13.26	□□□□□ -0.29
NUP50-218	ENST00000493456	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	TMEM14DP	A8MWL7	114 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	LGALS9	O00182	355 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	BPNT1	O95861	308 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	SRM	P19623	302 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	RTL8B	Q17RB0	113 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	VMA21	Q3ZAQ7	101 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	TEX45	Q8NA69	505 aa		13.25	□□□□□ -0.29
NUP50-218	ENST00000493456	SRSF12	Q8WXF0	261 aa	Known RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 96 ms