RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IHHQ14623 411 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 PTGES3Q15185 160 aaKnown RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FBXL19-AS1Q494R0 122 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 CENPWQ5EE01 88 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM78AQ5JUQ0 283 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 HES5Q5TA89 166 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 HES3Q5TGS1 186 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ELP2Q6IA86 826 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF544Q6NX49 715 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 LYPD2Q6UXB3 125 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 OLIG3Q7RTU3 272 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 YIPF7Q8N8F6 280 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 OR10K1Q8NGX5 313 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4X1Q8NH49 305 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 DCAKDQ8WVC6 231 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FGF13Q92913 245 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 TBX5Q99593 518 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 SOSTQ9BQB4 213 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 BATF3Q9NR55 127 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 CISHQ9NSE2 258 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM49BQ9NUQ9 324 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 PRR34Q9NV39 138 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ARMC1Q9NVT9 282 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 SS18L2Q9UHA2 77 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 POLR1DQ9Y2S0 133 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ANAPC1Q9H1A4 1944 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF638Q14966 1978 aaKnown RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 MYOFQ9NZM1 2061 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 RIF1Q5UIP0 2472 aaKnown RBP2.21□□□□□ -2.05
DEPDC1-204ENST00000489862 DENND4CQ5VZ89 1909 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 HCFC1P51610 2035 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 OR4C46A6NHA9 309 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 GABARAPO95166 117 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 IL3P08700 152 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00614P0C842 121 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 P0C879 139 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 PSMB1P20618 241 aaKnown RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC6A1P30531 599 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 RCVRNP35243 200 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 APLNRP35414 380 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SLCO1A2P46721 670 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 RAB25P57735 213 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 PRDX4Q13162 271 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 EIF4EBP2Q13542 120 aaPredicted RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 HTR4Q13639 388 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 CDK10Q15131 360 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ACOT6Q3I5F7 207 aaPredicted RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 AVPI1Q5T686 147 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 UGT2A3Q6UWM9 527 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SPNS3Q6ZMD2 512 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 Q6ZRU5 148 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 RNF165Q6ZSG1 346 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SHISA6Q6ZSJ9 500 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 C6orf120Q7Z4R8 191 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 TMED4Q7Z7H5 227 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF429Q86V71 674 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF567Q8N184 647 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM86AQ8N2M4 240 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00612Q8N6U2 182 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC35G3Q8N808 338 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM75Q8N9X5 138 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC26A10Q8NG04 563 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2D3Q8NGH3 330 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 CYGBQ8WWM9 190 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM158Q8WZ71 300 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SNF8Q96H20 258 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ANKRD36BP1Q96IX9 119 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 TIMM17AQ99595 171 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 MRPL20Q9BYC9 149 aaKnown RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 DEFB126Q9BYW3 111 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC00597Q9H2U6 94 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 PLEKHF2Q9H8W4 249 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ENY2Q9NPA8 101 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 PARVAQ9NVD7 372 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 C14orf105Q9NVL8 296 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 HDGFL3Q9Y3E1 203 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM32AQ9Y421 112 aaKnown RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 INSIG2Q9Y5U4 225 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 EP300Q09472 2414 aaPredicted RBP2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 COL4A2P08572 1712 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 OBSL1O75147 1896 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 AGRNO00468 2067 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 ATG2BQ96BY7 2078 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 SDK1Q7Z5N4 2213 aa2.21□□□□□ -2.06
DEPDC1-204ENST00000489862 LAMA5O15230 3695 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 LOC102724200A0A096LPH7 203 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 EXOC1LA0A1B0GW35 172 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 C4orf51C9J302 202 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MANBAO00462 879 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MYL12BO14950 172 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TCAPO15273 167 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 GYG2O15488 501 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ATF1P18846 271 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 GZMHP20718 246 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CCL1P22362 96 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MSNP26038 577 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF136P52737 540 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 RAB5BP61020 215 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 RBX1P62877 108 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms