RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MRPS7Q9Y2R9 242 aaKnown RBP7.17□□□□□ -1.26
HDAC6-232ENST00000489053 ETV7Q9Y603 341 aa7.17□□□□□ -1.26
HDAC6-232ENST00000489053 TRBV6-7A0A0A0MS04 114 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 IGHV7-81A0A0B4J1V7 117 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 IGKV1-6A0A0C4DH72 117 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 A0A1W2PN81 502 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 TMEM235A6NFC5 223 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 G3V318 75 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 J3QRK9 145 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 AIREO43918 545 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 CREBL2O60519 120 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 SLC22A5O76082 557 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 ACTL6BO94805 426 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 NDUFA3O95167 84 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 CHRNA7P36544 502 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 LGALS7P47929 136 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 LUMP51884 338 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 SCAND1P57086 179 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 DCTN2Q13561 401 aaKnown RBP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 PSG5Q15238 335 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 SRSF7Q16629 238 aaKnown RBP eCLIP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 VMA21Q3ZAQ7 101 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 ACTBL2Q562R1 376 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 DEFB121Q5J5C9 76 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 Q6ZPA2 131 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 C18orf65Q6ZTR6 163 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 PPP1R27Q86WC6 154 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 NUDCD2Q8WVJ2 157 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 ARPC1AQ92747 370 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 RBMXL1Q96E39 390 aaKnown RBP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 RITA1Q96K30 269 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 OR5B12Q96R08 314 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 PHB2Q99623 299 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 DCSTAMPQ9H295 470 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 PRELID3BQ9Y3B1 194 aa7.16□□□□□ -1.26
HDAC6-232ENST00000489053 PRKDCP78527 4128 aaKnown RBP7.16□□□□□ -1.26
HDAC6-232ENST00000489053 TRAV18A0A075B6X5 111 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 MPPED1O15442 326 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 SLC25A17O43808 307 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 TMEM127O75204 238 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 TUSC2O75896 110 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 CA2P00918 260 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 OR8U8P0C7N1 319 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-232ENST00000489053 CX3CL1P78423 397 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 ZNF383Q8NA42 475 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 OR11H1Q8NG94 326 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 OR1N2Q8NGR9 330 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 S100A16Q96FQ6 103 aaKnown RBP7.15□□□□□ -1.26
HDAC6-232ENST00000489053 RAX2Q96IS3 184 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 UBE2E2Q96LR5 201 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 IFT46Q9NQC8 304 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC6-232ENST00000489053 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-232ENST00000489053 SDHAF2Q9NX18 166 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 KCNK7Q9Y2U2 307 aa7.15□□□□□ -1.26
HDAC6-232ENST00000489053 A0A0A6YYH2 397 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 C13orf42A0A1B0GVH6 325 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 A6NJ64 397 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 SEC14L6B5MCN3 397 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 CRYZL1O95825 349 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 IGKV1-16P04430 117 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 CLEC2LP0C7M8 214 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 NFYAP23511 347 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-232ENST00000489053 PSMB8P28062 276 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 RAB9AP51151 201 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 TPPP2P59282 170 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 LSM3P62310 102 aaKnown RBP7.14□□□□□ -1.27
HDAC6-232ENST00000489053 DGCR2P98153 550 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 CFHR3Q02985 330 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 ZNF616Q08AN1 781 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 FXYD3Q14802 87 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 C9orf66Q5T8R8 295 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 CNIH2Q6PI25 160 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 ZNF562Q6V9R5 426 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 ETV3LQ6ZN32 361 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 Q6ZS49 121 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 NR2C2APQ86WQ0 139 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 RNF152Q8N8N0 203 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 BVESQ8NE79 360 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 LFNGQ8NES3 379 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 P2RX4Q99571 388 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 FAM103A1Q9BTL3 118 aaKnown RBP7.14□□□□□ -1.27
HDAC6-232ENST00000489053 SLA2Q9H6Q3 261 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 ANXA10Q9UJ72 324 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 OR2W1Q9Y3N9 320 aa7.14□□□□□ -1.27
HDAC6-232ENST00000489053 SMIM31A0A1B0GVY4 71 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 LY86O95711 162 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 TRGV3P03979 118 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 CBX5P45973 191 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 AKIRIN2Q53H80 203 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 TMEM69Q5SWH9 247 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 KCTD9Q7L273 389 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 H1FOOQ8IZA3 346 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-232ENST00000489053 ZNF645Q8N7E2 425 aa7.13□□□□□ -1.27
HDAC6-232ENST00000489053 SAMD12Q8N8I0 201 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms