RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PDE6HQ13956 83 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 RPS26P11Q5JNZ5 115 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 TMEM255AQ5JRV8 349 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NEGR1Q7Z3B1 354 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 FAM156AQ8NDB6 213 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 LOXL4Q96JB6 756 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 RPUSD1Q9UJJ7 312 aaKnown RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 DEPDC5O75140 1603 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 VDAC2P45880 294 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 UBE2AP49459 152 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 RPS11P62280 158 aaKnown RBP eCLIP4.74□□□□□ -1.65
USF3-202ENST00000478658 KLF9Q13886 244 aaPredicted RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 IBA57Q5T440 356 aaKnown RBP4.74□□□□□ -1.65
USF3-202ENST00000478658 DEFB108BQ8NET1 73 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 OR9G1Q8NH87 305 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 ARHGAP32A7KAX9 2087 aa4.74□□□□□ -1.65
USF3-202ENST00000478658 NUP98P52948 1817 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 TAF1LQ8IZX4 1826 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ZBTB42B2RXF5 422 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SOCS3O14543 225 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ZNF83P51522 516 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ZP4Q12836 540 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 LAX1Q8IWV1 398 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SMRP1Q8NCR6 262 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 RNF5Q99942 180 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 NDUFAF3Q9BU61 184 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 COL11A1P12107 1806 aaPredicted RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 CRYBG1Q9Y4K1 1723 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 C1orf167Q5SNV9 1468 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ARID1AO14497 2285 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 A0A1W2PPI3 338 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 GNG10P50151 68 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 LSM6P62312 80 aaKnown RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 SLC25A11Q02978 314 aaKnown RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 FOXC1Q12948 553 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SYT14P1Q58G82 188 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 GUSBP11Q6P575 273 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 IL17RELQ6ZVW7 336 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SDF2Q99470 211 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 DEFB127Q9H1M4 99 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 THADAQ6YHU6 1953 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 TRGV4A0A0C4DH28 118 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 MMP23AO75900 390 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 NXPH3O95157 252 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 STATHP02808 62 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 RELAQ04206 551 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 PRSS36Q5K4E3 855 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SPEM1Q8N4L4 309 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 OR11G2Q8NGC1 345 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 GGACTQ9BVM4 153 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 NRSN2Q9GZP1 204 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 DLL3Q9NYJ7 618 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 DOCK5Q9H7D0 1870 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 PRR32B1ATL7 298 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 J3QR06 171 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 CSN3P07498 182 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ERGP11308 486 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 FBXO27Q8NI29 283 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 RELTQ969Z4 430 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ATOH8Q96SQ7 321 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 CMC2Q9NRP2 79 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 KLF2Q9Y5W3 355 aaPredicted RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 V9GYY9 64 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 QSER1Q2KHR3 1735 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 RPL27AP46776 148 aaKnown RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 HIST1H4AP62805 103 aaKnown RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 NIT1Q86X76 327 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 CLDN19Q8N6F1 224 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 THAP8Q8NA92 274 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 OR10S1Q8NGN2 331 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
USF3-202ENST00000478658 P2RY4P51582 365 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 C17orf47Q8NEP4 570 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 RNF166Q96A37 237 aaPredicted RBP4.73□□□□□ -1.65
USF3-202ENST00000478658 ZNF524Q96C55 264 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 KCNK17Q96T54 332 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 SLC25A37Q9NYZ2 338 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 MYOFQ9NZM1 2061 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 A0A1W2PR48 441 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 TMEM150BA6NC51 233 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 IFITM5A6NNB3 132 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 IGHG3P01860 377 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 APOC4P55056 127 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 PMP22Q01453 160 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 FCRLBQ6BAA4 426 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 ST20Q9HBF5 79 aa4.73□□□□□ -1.65
USF3-202ENST00000478658 KCPQ6ZWJ8 1503 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TRBV20OR9-2A0A075B6H5 130 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TM4SF5O14894 197 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TRACP01848 142 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 KLK2P20151 261 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 LINC01587Q99440 93 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 MTCH2Q9Y6C9 303 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 DLEC1Q9Y238 1755 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 FOXI3A8MTJ6 420 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 NPIPB11E5RHQ5 1161 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 H0Y980 276 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms