RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LGALS7P47929 136 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 CFHR3Q02985 330 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 ZNF260Q3ZCT1 412 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 CNIH2Q6PI25 160 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 ZNF383Q8NA42 475 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 ABHD5Q8WTS1 349 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 NUDCD2Q8WVJ2 157 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 SDHAF2Q9NX18 166 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 ZMAT5Q9UDW3 170 aaKnown RBP13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
SCARNA2-201ENST00000458748 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 IGLL1P15814 213 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 PSMB8P28062 276 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 PYHIN1Q6K0P9 492 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 LINC00482Q8N8I6 264 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 YIPF6Q96EC8 236 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 S100A16Q96FQ6 103 aaKnown RBP13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 ANXA10Q9UJ72 324 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 OR2W1Q9Y3N9 320 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 WSB1Q9Y6I7 421 aa13.73□□□□□ -0.21
SCARNA2-201ENST00000458748 CCL24O00175 119 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 PROP1O75360 226 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 IGKV1-16P04430 117 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 ARPC4P59998 168 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 PSG5Q15238 335 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 ZNF562Q6V9R5 426 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 OR5H6Q8NGV6 325 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 RBMXL1Q96E39 390 aaKnown RBP13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 ELF5Q9UKW6 265 aaPredicted RBP13.72□□□□□ -0.21
SCARNA2-201ENST00000458748 PPIFP30405 207 aaKnown RBP13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 CBX5P45973 191 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 CX3CL1P78423 397 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 ECSCRQ19T08 205 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 UBE2NLQ5JXB2 153 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 ZNF645Q8N7E2 425 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 SLC25A38Q96DW6 304 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
SCARNA2-201ENST00000458748 IGKV1D-8A0A087WSZ0 117 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 G3V318 75 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 SHOXO15266 292 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 CNIH1O95406 144 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 CA2P00918 260 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 IGLV1-40P01703 118 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 RAB25P57735 213 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 FOXB2Q5VYV0 432 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 ETV3LQ6ZN32 361 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 PPP1R27Q86WC6 154 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 BEST4Q8NFU0 473 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 OR5M8Q8NGP6 311 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 KCTD12Q96CX2 325 aaKnown RBP13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 P2RX4Q99571 388 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 VSIG4Q9Y279 399 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 MRPS7Q9Y2R9 242 aaKnown RBP13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
SCARNA2-201ENST00000458748 A0A1W2PN81 502 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 XRCC3O43542 346 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 SLC25A17O43808 307 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 SSX5O60225 188 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 HLA-DQB1P01920 261 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 CHRNA7P36544 502 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 RPS19P39019 145 aaKnown RBP13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 RAB9AP51151 201 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 LSM3P62310 102 aaKnown RBP13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 VMA21Q3ZAQ7 101 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 ACTBL2Q562R1 376 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 C18orf65Q6ZTR6 163 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 BVESQ8NE79 360 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 A3GALT2U3KPV4 340 aa13.69□□□□□ -0.22
SCARNA2-201ENST00000458748 TRIM64CA6NLI5 447 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 FCN1O00602 326 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 DUTP33316 252 aaKnown RBP13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 LINC00205P59089 165 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 TMEM69Q5SWH9 247 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 UNQ5815/PRO19632Q6UWF5 114 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 HOGA1Q86XE5 327 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 ZNF491Q8N8L2 437 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 OSR1Q8TAX0 266 aaPredicted RBP13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 MYOZ3Q8TDC0 251 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 SLC25A46Q96AG3 418 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 TMEM68Q96MH6 324 aa13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 HSD17B10Q99714 261 aaKnown RBP13.68□□□□□ -0.22
SCARNA2-201ENST00000458748 SLA2Q9H6Q3 261 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms