RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-206	ENST00000446501	TRAPPC1	Q9Y5R8	145 aa		13.76	□□□□□ -0.21
BRF1-206	ENST00000446501	UBE2L5P	A0A1B0GUS4	154 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	PRR18	Q8N4B5	295 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	GPR146	Q96CH1	333 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	DCHS1	Q96JQ0	3298 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	KLRC4-KLRK1	H3BQV0	150 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	GYPA	P02724	150 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	MRPS11	P82912	194 aa	Known RBP	13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	TMEM41B	Q5BJD5	291 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	MKX	Q8IYA7	352 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	ZNF295-AS1	Q8N0V1	137 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	TECTB	Q96PL2	329 aa		13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	RIMS4	Q9H426	269 aa	Predicted RBP	13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.75	□□□□□ -0.21
BRF1-206	ENST00000446501	SMG1	Q96Q15	3661 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	SLC22A20	A6NK97	555 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501		M0QZK8	103 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	GGCT	O75223	188 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	EGR1	P18146	543 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	SPANXN5	Q5MJ07	72 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	OR8G2P	Q6IF36	304 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	PSENEN	Q9NZ42	101 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	PPIAL4A	Q9Y536	164 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	DIDO1	Q9BTC0	2240 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	SIAH2	O43255	324 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	SERPINE2	P07093	398 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	PSMB3	P49720	205 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	IL1F10	Q8WWZ1	152 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	ESPL1	Q14674	2120 aa		13.74	□□□□□ -0.21
BRF1-206	ENST00000446501	NAPSA	O96009	420 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	IGKV1D-33	P01593	117 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	IGKV1-33	P01594	117 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	BRS3	P32247	399 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ARR3	P36575	388 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ALKBH6	Q3KRA9	238 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501		Q6ZRM9	215 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	TCF23	Q7RTU1	214 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	RPP25L	Q8N5L8	163 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ZNF525	Q8N782	197 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	OR5P3	Q8WZ94	311 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	WDYHV1	Q96HA8	205 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	PATZ1	Q9HBE1	687 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	CACNG5	Q9UF02	275 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	MED12L	Q86YW9	2145 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	TRGV5	A0A0B4J1U4	118 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	NKX2-8	O15522	239 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	PSG2	P11465	335 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	DEFA4	P12838	97 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	CD46	P15529	392 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ZNF16	P17020	682 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	UCP1	P25874	307 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	RNPS1	Q15287	305 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ZNF766	Q5HY98	468 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	FER1L6-AS2	Q96M78	137 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	OR4C12	Q96R67	309 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ANKRD30BL	A7E2S9	258 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	LYZL6	O75951	148 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	IL3RA	P26951	378 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	CISD2	Q8N5K1	135 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	ABHD14B	Q96IU4	210 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	HIPK2	Q9H2X6	1198 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	MANBAL	Q9NQG1	85 aa		13.73	□□□□□ -0.21
BRF1-206	ENST00000446501	TRAV24	A0A0B4J272	114 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	C1QTNF9B	B2RNN3	333 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	SS18L1	O75177	396 aa	Predicted RBP	13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	RPS16	P62249	146 aa	Known RBP	13.72	□□□□□ -0.21
BRF1-206	ENST00000446501		Q8NFD4	153 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	OR10V1	Q8NGI7	309 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	OR2J1	Q9GZK6	312 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	PGLYRP1	O75594	196 aa	Predicted RBP	13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	LINC00614	P0C842	121 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	GAGE1	Q13065	139 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	FBXW9	Q5XUX1	488 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	KCNIP4	Q6PIL6	250 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	HAPLN4	Q86UW8	402 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	OR5A2	Q8NGI9	324 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	VN1R17P	Q8TDU5	208 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	MSL2	Q9HCI7	577 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	TMEM9B	Q9NQ34	198 aa		13.72	□□□□□ -0.21
BRF1-206	ENST00000446501	CCL11	P51671	97 aa		13.71	□□□□□ -0.21
BRF1-206	ENST00000446501	KMT2E	Q8IZD2	1858 aa		13.71	□□□□□ -0.21
BRF1-206	ENST00000446501	OTOGL	Q3ZCN5	2332 aa		13.71	□□□□□ -0.21
BRF1-206	ENST00000446501	SYNGR2	O43760	224 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	PAGE4	O60829	102 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	C11orf42	Q8N5U0	333 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	CMTM2	Q8TAZ6	248 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	BCL2L2	Q92843	193 aa	Predicted RBP	13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	RAB40C	Q96S21	281 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	MIEN1	Q9BRT3	115 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	RNF150	Q9ULK6	438 aa		13.71	□□□□□ -0.22
BRF1-206	ENST00000446501	CACNA1G	O43497	2377 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	CLEC18A	A5D8T8	446 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	TRIP6	Q15654	476 aa	Known RBP	13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	LRRC75B	Q2VPJ9	315 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	WDR86	Q86TI4	376 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	CLEC18C	Q8NCF0	446 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	AGMAT	Q9BSE5	352 aa		13.7	□□□□□ -0.22
BRF1-206	ENST00000446501	DNAJC4	Q9NNZ3	241 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms