RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SUMO3P55854 103 aaPredicted RBP4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 GPM6BQ13491 265 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 CCDC144NLQ6NUI1 221 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 LINC00596Q86U02 117 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 OOSP2Q86WS3 158 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF547Q8IVP9 402 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 C2orf73Q8N5S3 287 aaPredicted RBP4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM251Q8N6I4 163 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SUMF1Q8NBK3 374 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR2Z1Q8NG97 314 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR51E1Q8TCB6 317 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF418Q8TF45 676 aaPredicted RBP4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SSC4DQ8WTU2 575 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 C11orf52Q96A22 123 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SMIM10Q96HG1 83 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 VSTM2LQ96N03 204 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 DGAT2Q96PD7 388 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR6C1Q96RD1 312 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 COA3Q9Y2R0 106 aaPredicted RBP4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
VTI1BP4-201ENST00000427516 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 KIAA1549LQ6ZVL6 1849 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TRGV10A0A0A0MS01 117 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGKV1-8A0A0C4DH67 115 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 MUC21A0A0G2JKD1 596 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 MUC21A0A140T8X8 626 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 EDDM13A0A1B0GTR0 161 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 UBE2L5PA0A1B0GUS4 154 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 C11orf98E9PRG8 122 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 F8W735 103 aaPredicted RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 IFNL4K9M1U5 179 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 PLPP3O14495 311 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TM4SF5O14894 197 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 LAMTOR5O43504 91 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 VAMP5O95183 116 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TSPAN13O95857 204 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGHG1P01857 330 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 THBDP07204 575 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 CTSBP07858 339 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 ADH4P08319 380 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 PPIAL4GP0DN37 164 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 FCGR2AP12318 317 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 AREGP15514 252 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGLL1P15814 213 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGFBP6P24592 240 aaPredicted RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 SRIP30626 198 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 DUSP3P51452 185 aaPredicted RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF83P51522 516 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 GFRA1P56159 465 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 RPS18P62269 152 aaKnown RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 GAGE5Q13069 117 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 GAGE6Q13070 117 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 DEFB134Q4QY38 66 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 Q56UQ5 140 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 CXorf66Q5JRM2 361 aaPredicted RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 MUC21Q5SSG8 566 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 Q6ZS92 163 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 MARCH3Q86UD3 253 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF645Q8N7E2 425 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 BCORP1Q8N888 145 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 WFDC5Q8TCV5 224 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TSKUQ8WUA8 353 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 BLNKQ8WV28 456 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 SPTSSAQ969W0 71 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM45BQ96B21 275 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TM4SF19Q96DZ7 209 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 GPR82Q96P67 336 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 NPFFR1Q9GZQ6 430 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR2D2Q9H210 308 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM167BQ9NRX6 74 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 LANCL2Q9NS86 450 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 PLA2G3Q9NZ20 509 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 RALYQ9UKM9 306 aaKnown RBP4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 HCFC2Q9Y5Z7 792 aa4.77□□□□□ -1.65
VTI1BP4-201ENST00000427516 PPIAL4EA0A075B759 164 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 TRAV26-1A0A087WT03 109 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A087WV48 116 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 PPIAL4CA0A0B4J2A2 164 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 ODAMA1E959 279 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 IZUMO1RA6ND01 250 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 FRG2CA6NGY1 282 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 C17orf51A8MQB3 221 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 PPIAL4DF5H284 164 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 F2RL2O00254 374 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 RAB29O14966 203 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 RER1O15258 196 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 TNFSF14O43557 240 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 NUPR1O60356 82 aa4.76□□□□□ -1.65
VTI1BP4-201ENST00000427516 DUSP11O75319 330 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms