RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RAB9BQ9NP90 201 aa14.13□□□□□ -0.15
PTPRC-206ENST00000413409 JPT1Q9UK76 154 aa14.13□□□□□ -0.15
PTPRC-206ENST00000413409 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
PTPRC-206ENST00000413409 TCF21O43680 179 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 PITX3O75364 302 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 TFF1P04155 84 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 ZP3P21754 424 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 CD80P33681 288 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 TMEM33P57088 247 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 ID3Q02535 119 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 DTX2Q86UW9 622 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 ZNF561Q8N587 486 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 UBAC2Q8NBM4 344 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 RNF141Q8WVD5 230 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 ARL11Q969Q4 196 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 ARV1Q9H2C2 271 aa14.12□□□□□ -0.15
PTPRC-206ENST00000413409 IGHV3OR15-7A0A075B7D8 119 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 VSTM5A8MXK1 200 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 A8MXK9 166 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 TNFRSF1AP19438 455 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 GZMHP20718 246 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 SSTR5P35346 364 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 CATR1Q13166 79 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 FAM209AQ5JX71 171 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 TEX36Q5VZQ5 186 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 RPL7L1Q6DKI1 246 aaKnown RBP14.11□□□□□ -0.15
PTPRC-206ENST00000413409 CLEC2AQ6UVW9 174 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 CCDC28AQ8IWP9 274 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 ZNF525Q8N782 197 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 BOLLQ8N9W6 283 aaKnown RBP14.11□□□□□ -0.15
PTPRC-206ENST00000413409 OR52L2PQ8NGH6 319 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 EDARADDQ8WWZ3 215 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 FAM234AQ9H0X4 552 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 OR2D2Q9H210 308 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 OR6C3Q9NZP0 311 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 PPP1R3CQ9UQK1 317 aa14.11□□□□□ -0.15
PTPRC-206ENST00000413409 BORCS7-ASMTA0A0B4J1R7 106 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 C17orf100A8MU93 164 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 NUDT19A8MXV4 375 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 F2RL2O00254 374 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 SHOXO15266 292 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 CD3EP07766 207 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 OR4A8P0C604 315 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 IRF2P14316 349 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 MUC1P15941 1255 aaPredicted RBP14.1□□□□□ -0.15
PTPRC-206ENST00000413409 SLC25A16P16260 332 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 DSCR9P59020 149 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 EDDM3AQ14507 147 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 TMEM30BQ3MIR4 351 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 OR2C3Q8N628 320 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 TMED6Q8WW62 240 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 GPR146Q96CH1 333 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 SAT2Q96F10 170 aaPredicted RBP14.1□□□□□ -0.15
PTPRC-206ENST00000413409 SLC25A31Q9H0C2 315 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 OR2S2Q9NQN1 319 aa14.1□□□□□ -0.15
PTPRC-206ENST00000413409 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
PTPRC-206ENST00000413409 ITGB1BP1O14713 200 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 PPP1CCP36873 323 aaKnown RBP14.09□□□□□ -0.15
PTPRC-206ENST00000413409 POLR2GP62487 172 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPRC-206ENST00000413409 VAMP2P63027 116 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 DEFA6Q01524 100 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 EWSR1Q01844 656 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPRC-206ENST00000413409 BAXQ07812 192 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 ZNF585BQ52M93 769 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 ZNF66Q6ZN08 573 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 RNASE11Q8TAA1 199 aaKnown RBP14.09□□□□□ -0.15
PTPRC-206ENST00000413409 C5orf30Q96GV9 206 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 COA4Q9NYJ1 87 aa14.09□□□□□ -0.15
PTPRC-206ENST00000413409 A0A0G2JRQ6 117 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 LRRC30A6NM36 301 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 KRBOX1C9JBD0 128 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 SSSCA1O60232 199 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 ATG12O94817 140 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 IGKV1-5P01602 117 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 USF1P22415 310 aaPredicted RBP14.08□□□□□ -0.16
PTPRC-206ENST00000413409 TPRX1Q8N7U7 411 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 C10orf105Q8TEF2 133 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 GAFA1Q96PS6 74 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 EGLN1Q9GZT9 426 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF665Q9H7R5 613 aa14.08□□□□□ -0.16
PTPRC-206ENST00000413409 CISD1Q9NZ45 108 aaKnown RBP14.08□□□□□ -0.16
PTPRC-206ENST00000413409 VWFP04275 2813 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 RAB19A4D1S5 217 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 NKX6-3A6NJ46 265 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 FAM90A26D6RGX4 464 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 WRBO00258 174 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 YPEL1O60688 119 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 VENTXO95231 258 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 HNF1AP20823 631 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 COMPP49747 757 aaPredicted RBP14.07□□□□□ -0.16
PTPRC-206ENST00000413409 SULT1A2P50226 295 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 AKR1C2P52895 323 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 CXorf66Q5JRM2 361 aaPredicted RBP14.07□□□□□ -0.16
PTPRC-206ENST00000413409 UQCC3Q6UW78 93 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF788Q6ZQV5 615 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 FAM168AQ92567 244 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 YPEL2Q96QA6 119 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 RAB40CQ96S21 281 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms