RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IGLV3-25P01717 112 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 REG1AP05451 166 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 MPC1LP0DKB6 136 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYCR1P32322 319 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRSS3P35030 304 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CXCL12P48061 93 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SULT1A1P50225 295 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SULT1A2P50226 295 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 GNGT1P63211 74 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FMODQ06828 376 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LAMTOR4Q0VGL1 99 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TAF9Q16594 264 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LTC4SQ16873 150 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TRMT12Q53H54 448 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYCR3Q53H96 274 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q5BKY6 102 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPATA31B1PQ5VZV4 182 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 HBMQ6B0K9 141 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TEX261Q6UWH6 196 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SAXO1Q8IYX7 474 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 GATD1Q8NB37 220 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR10G2Q8NGC3 310 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4K17Q8NGC6 315 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4D11Q8NGI4 311 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C4Q8NGS5 318 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 EEF1AKMT1Q8WVE0 214 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 REEP6Q96HR9 211 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC35G5Q96KT7 338 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CAPZA3Q96KX2 299 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CST9LQ9H4G1 147 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM96AQ9H5X1 160 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CALML5Q9NZT1 146 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 METTL1Q9UBP6 276 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 HSPB8Q9UJY1 196 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 RAB22AQ9UL26 194 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CARHSP1Q9Y2V2 147 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 U3KQ87 197 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGSF9BQ9UPX0 1349 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 MBD5Q9P267 1494 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 DOCK9Q9BZ29 2069 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LOC100130705A0A1B0GUX0 176 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPAARA0A1B0GVQ0 90 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4C46A6NHA9 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 I3L4J1 428 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC17A3O00476 420 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 MRASO14807 208 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SYNGR1O43759 233 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PIAS1O75925 651 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TSPAN19P0C672 248 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 UBBP0CG47 229 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 DRD3P35462 400 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PSMB2P49721 201 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 RAB8AP61006 207 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPP3R1P63098 170 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 BAXQ07812 192 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR8B8Q15620 311 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SCGB2B2Q4G0G5 96 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ATP6AP1LQ52LC2 224 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CLEC12AQ5QGZ9 265 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 LDLRAD2Q5SZI1 272 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC18Q5T9S5 1454 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 C1orf195Q5TG92 126 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TNS3Q68CZ2 1445 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CLEC19AQ6UXS0 136 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CALHM3Q86XJ0 350 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM256Q8N2U0 113 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 GDPD1Q8N9F7 314 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TSTD1Q8NFU3 115 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR1L8Q8NGR8 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4C6Q8NH72 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 FNDC9Q8TBE3 224 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZMYND19Q96E35 227 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 IMP4Q96G21 291 aaKnown RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7D2Q96RA2 312 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CMSS1Q9BQ75 279 aaKnown RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 NDFIP1Q9BT67 221 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 EFCAB11Q9BUY7 163 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 LPAR5Q9H1C0 372 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 FBXO6Q9NRD1 293 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM38BQ9NVV0 291 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 VIRMAQ69YN4 1812 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PHLPP1O60346 1717 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC141Q6ZP82 1450 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 TEX14Q8IWB6 1497 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPATA31E1Q6ZUB1 1445 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MAP1LC3B2A6NCE7 125 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTNL10A8MVZ5 291 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CRXO43186 299 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ORC5O43913 435 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 TPST1O60507 370 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 STK16O75716 305 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PFN1P07737 140 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C7P0DN81 318 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPL7P18124 248 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 HIST1H1TP22492 207 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRTN3P24158 256 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPA3P35244 121 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms