RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IGLV3-25P01717 112 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 REG1AP05451 166 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 MPC1LP0DKB6 136 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYCR1P32322 319 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRSS3P35030 304 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CXCL12P48061 93 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SULT1A1P50225 295 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SULT1A2P50226 295 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 GNGT1P63211 74 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FMODQ06828 376 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LAMTOR4Q0VGL1 99 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TAF9Q16594 264 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LTC4SQ16873 150 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TRMT12Q53H54 448 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYCR3Q53H96 274 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q5BKY6 102 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPATA31B1PQ5VZV4 182 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 HBMQ6B0K9 141 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 TEX261Q6UWH6 196 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SAXO1Q8IYX7 474 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 GATD1Q8NB37 220 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR10G2Q8NGC3 310 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4K17Q8NGC6 315 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4D11Q8NGI4 311 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C4Q8NGS5 318 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 EEF1AKMT1Q8WVE0 214 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 REEP6Q96HR9 211 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC35G5Q96KT7 338 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CAPZA3Q96KX2 299 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CST9LQ9H4G1 147 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM96AQ9H5X1 160 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CALML5Q9NZT1 146 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 METTL1Q9UBP6 276 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 HSPB8Q9UJY1 196 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 RAB22AQ9UL26 194 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CARHSP1Q9Y2V2 147 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 U3KQ87 197 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGSF9BQ9UPX0 1349 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 MBD5Q9P267 1494 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 DOCK9Q9BZ29 2069 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 LOC100130705A0A1B0GUX0 176 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPAARA0A1B0GVQ0 90 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4C46A6NHA9 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 I3L4J1 428 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC17A3O00476 420 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 MRASO14807 208 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SYNGR1O43759 233 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PIAS1O75925 651 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TSPAN19P0C672 248 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 UBBP0CG47 229 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 DRD3P35462 400 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PSMB2P49721 201 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 RAB8AP61006 207 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPP3R1P63098 170 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 BAXQ07812 192 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR8B8Q15620 311 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 SCGB2B2Q4G0G5 96 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ATP6AP1LQ52LC2 224 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CLEC12AQ5QGZ9 265 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 LDLRAD2Q5SZI1 272 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC18Q5T9S5 1454 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 C1orf195Q5TG92 126 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TNS3Q68CZ2 1445 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CLEC19AQ6UXS0 136 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CALHM3Q86XJ0 350 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM256Q8N2U0 113 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 GDPD1Q8N9F7 314 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TSTD1Q8NFU3 115 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR1L8Q8NGR8 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4C6Q8NH72 309 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 FNDC9Q8TBE3 224 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZMYND19Q96E35 227 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 IMP4Q96G21 291 aaKnown RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7D2Q96RA2 312 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 CMSS1Q9BQ75 279 aaKnown RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 NDFIP1Q9BT67 221 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 EFCAB11Q9BUY7 163 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 LPAR5Q9H1C0 372 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 FBXO6Q9NRD1 293 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM38BQ9NVV0 291 aa3.06□□□□□ -1.92
HMGB1P13-201ENST00000406019 VIRMAQ69YN4 1812 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PHLPP1O60346 1717 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC141Q6ZP82 1450 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 TEX14Q8IWB6 1497 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPATA31E1Q6ZUB1 1445 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MAP1LC3B2A6NCE7 125 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTNL10A8MVZ5 291 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CRXO43186 299 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ORC5O43913 435 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 TPST1O60507 370 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 STK16O75716 305 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PFN1P07737 140 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C7P0DN81 318 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPL7P18124 248 aaKnown RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 HIST1H1TP22492 207 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRTN3P24158 256 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPA3P35244 121 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms