RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 APH1BQ8WW43 257 aa8.85□□□□□ -0.99
SPTLC1P3-201ENST00000403408 FAM46BQ96A09 425 aa8.85□□□□□ -0.99
SPTLC1P3-201ENST00000403408 C5orf30Q96GV9 206 aa8.85□□□□□ -0.99
SPTLC1P3-201ENST00000403408 MRPS18AQ9NVS2 196 aaKnown RBP8.85□□□□□ -0.99
SPTLC1P3-201ENST00000403408 APOBP04114 4563 aaKnown RBP8.85□□□□□ -0.99
SPTLC1P3-201ENST00000403408 IGKV1-6A0A0C4DH72 117 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 AIREO43918 545 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 CRTAPO75718 401 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 CPEP16870 476 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 GPR176Q14439 515 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 TATDN3Q17R31 274 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 DNAL1Q4LDG9 190 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 AWAT2Q6E213 333 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 C19orf35Q6ZS72 473 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 JAGN1Q8N5M9 183 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 ZFP41Q8N8Y5 198 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 CCDC197Q8NCU1 140 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 RHOXF1Q8NHV9 184 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 SNAPC3Q92966 411 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 USMG5Q96IX5 58 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 PGLYRP3Q96LB9 341 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 TSNAXQ99598 290 aaKnown RBP8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 KCNK15Q9H427 330 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 COA4Q9NYJ1 87 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 PEMTQ9UBM1 199 aa8.84□□□□□ -0.99
SPTLC1P3-201ENST00000403408 LOC102724200A0A096LPH7 203 aaPredicted RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 A0A0A6YYD4 124 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 A0A1B0GVY2 172 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 EI24O14681 340 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 ITGB1BP1O14713 200 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 RHOGP84095 191 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 SMN1Q16637 294 aaKnown RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 CCDC58Q4VC31 144 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 PHLDA1Q8WV24 401 aaPredicted RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 SMIM19Q96E16 107 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 CENPNQ96H22 339 aaPredicted RBP8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 NICN1Q9BSH3 213 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 MLXQ9UH92 298 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 STEAP1Q9UHE8 339 aa8.83□□□□□ -1
SPTLC1P3-201ENST00000403408 TMEM213A2RRL7 107 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 OR2C1O95371 312 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 SCTP09683 121 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 HTR2CP28335 458 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 CEACAM6P40199 344 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 DEFB135Q30KP9 77 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 PDPNQ86YL7 162 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 FGF20Q9NP95 211 aaPredicted RBP8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 CLEC2DQ9UHP7 191 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 KLK5Q9Y337 293 aaPredicted RBP8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 LRRC42Q9Y546 428 aa8.82□□□□□ -1
SPTLC1P3-201ENST00000403408 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 A0A0B4J203 849 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 SPRY2O43597 315 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 OR9G9P0C7N8 305 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 CBLN1P23435 193 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 LGALS7P47929 136 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 Q499Y3 187 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 TM4SF20Q53R12 229 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 ZNF485Q8NCK3 441 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 PTX4Q96A99 478 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 TMEM68Q96MH6 324 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 SLC35D1Q9NTN3 355 aa8.81□□□□□ -1
SPTLC1P3-201ENST00000403408 M0R1X1 148 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 WBP4O75554 376 aaKnown RBP8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 S1PR2O95136 353 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 IGHV3-23P01764 117 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 UNC119Q13432 240 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 C10orf55Q5SWW7 151 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 DERL3Q96Q80 235 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 BABAM2Q9NXR7 383 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 TECRQ9NZ01 308 aaKnown RBP8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 ABRACLQ9P1F3 81 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 TP53TG1Q9Y2A0 90 aa8.8□□□□□ -1
SPTLC1P3-201ENST00000403408 TRBV6-6A0A0A6YYG2 114 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 SNTNA6NMZ2 147 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 LGALS9O00182 355 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 DYNC1I1O14576 645 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 OR2J3O76001 311 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 NDUFB8O95169 186 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 CD3GP09693 182 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 FCGR1AP12314 374 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 BMI1P35226 326 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 RPS27AP62979 156 aaKnown RBP8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 HLA-DRB3P79483 266 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 QRFPP83859 136 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 ATP5G2Q06055 141 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 INSL4Q14641 139 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 PRSS8Q16651 343 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 TMEM177Q53S58 311 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms