RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 TM2D1Q9BX74 207 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 WNT16Q9UBV4 365 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 HTTP42858 3142 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 BLACEA4D250 179 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 PGLYRP1O75594 196 aaPredicted RBP9.36□□□□□ -0.91
USP6NL-202ENST00000379237 CER1O95813 267 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 MESP2Q0VG99 397 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 CATR1Q13166 79 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 SFTPA1Q8IWL2 248 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF611Q8N823 705 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 TMEM56-RWDD3S4R434 201 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 ASXL3Q9C0F0 2248 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 SCO2A0A1W2PP80 73 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 TOMM40O96008 361 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 DRD1P21728 446 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 CRIM1Q9NZV1 1036 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 ANAPC10Q9UM13 185 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 PHF3Q92576 2039 aaKnown RBP9.36□□□□□ -0.91
USP6NL-202ENST00000379237 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 HELTA6NFD8 242 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 OR10J4P0C629 311 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 CLEC1BQ9P126 229 aa9.36□□□□□ -0.91
USP6NL-202ENST00000379237 MS4A18H0YCH9 400 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 K7EQM0 130 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 CSN3P07498 182 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 FABP2P12104 132 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 UCP1P25874 307 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 RPL15P61313 204 aaKnown RBP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 MS4A18Q3C1V0 323 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 ACSM6Q6P461 480 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 MRPL21Q7Z2W9 205 aaKnown RBP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 PLPPR1Q8TBJ4 325 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 CLEC7AQ9BXN2 247 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 IGHV3-20A0A0C4DH32 117 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 VSTM5A8MXK1 200 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 HNRNPA1P09651 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 CKS1BP61024 79 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 ARF6P62330 175 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 GNB1P62873 340 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 OR8B8Q15620 311 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 ETV2O00321 342 aaPredicted RBP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 C16orf47Q6ZP98 133 aaPredicted RBP9.35□□□□□ -0.91
USP6NL-202ENST00000379237 DOLPP1Q86YN1 238 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 MYO7BQ6PIF6 2116 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 IGHV2-26A0A0B4J1V2 119 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 SPINK2P20155 84 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 NPY1RP25929 384 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 RUNX3Q13761 415 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 MOB1BQ7L9L4 216 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 SLC37A2Q8TED4 501 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 ST8SIA1Q92185 356 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 SAP30LQ9HAJ7 183 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
USP6NL-202ENST00000379237 A0A0C4DFX4 3053 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 TIMP3P35625 211 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 PRDX4Q13162 271 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 C1orf147Q96MC9 270 aaPredicted RBP9.34□□□□□ -0.91
USP6NL-202ENST00000379237 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.34□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF581Q9P0T4 197 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 A0A087X0K7 114 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 A0A1W2PS18 150 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 CHEK1O14757 476 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 AMY1AP04745 511 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 HOXC12P31275 282 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 NPBWR2P48146 333 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 CLDN18P56856 261 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 TFF3Q07654 80 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 FAM234AQ9H0X4 552 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 TM4SF4P48230 202 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
USP6NL-202ENST00000379237 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 OR1L3Q8NH93 324 aa9.34□□□□□ -0.91
USP6NL-202ENST00000379237 IGLC7A0M8Q6 106 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
USP6NL-202ENST00000379237 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 PIAS2O75928 621 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 CXorf1O96002 111 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 CTSBP07858 339 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 IGLL1P15814 213 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 DNASE2BQ8WZ79 361 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
USP6NL-202ENST00000379237 TCF20Q9UGU0 1960 aaKnown RBP9.33□□□□□ -0.92
USP6NL-202ENST00000379237 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms