RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 RSG1Q9BU20 258 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ID1P41134 155 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 OR1L6Q8NGR2 347 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 MAP1LC3CQ9BXW4 147 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 DOCK6Q96HP0 2047 aa16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SMPD2O60906 423 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 MRPL54Q6P161 138 aaKnown RBP16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 K7N7A8 449 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZNF880Q6PDB4 577 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 PKIAP61925 76 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 EFNB1P98172 346 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 TM2D1Q9BX74 207 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 NPVFQ9HCQ7 196 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IL17BQ9UHF5 180 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IGLV3-12A0A075B6K2 115 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 FGFRL1Q8N441 504 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 FADS6Q8N9I5 356 aa16.05■□□□□ 0.16
CNTNAP3B-203ENST00000377561 FAM90A26D6RGX4 464 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 RNF224P0DH78 156 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 REG1BP48304 166 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 COTL1Q14019 142 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 HSPB1P04792 205 aaKnown RBP16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 RFPL3SP0C7P2 107 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 J3QW42 95 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 MPDU1O75352 247 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IGFBP3P17936 291 aaPredicted RBP16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 CCL8P80075 99 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 C1QL2Q7Z5L3 287 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 CCL13Q99616 98 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 RBKSQ9H477 322 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SCN5AQ14524 2016 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 CORTO00230 105 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 TGIF1Q15583 401 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 STARD4Q96DR4 205 aa16.04■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZIC3O60481 467 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 KLF14Q8TD94 323 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SYNGR3O43761 229 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZNF25P17030 456 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 KIR2DL2P43627 348 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ITLN1Q8WWA0 313 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SLC25A33Q9BSK2 321 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 AKIRIN1Q9H9L7 192 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 WNT5AP41221 380 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 GAS1P54826 345 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 P2RX4Q99571 388 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SUCLG1P53597 346 aaKnown RBP16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 DLX1P56177 255 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZNF818PQ6ZRF7 136 aa16.03■□□□□ 0.16
CNTNAP3B-203ENST00000377561 CEBPDP49716 269 aaPredicted RBP16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IZUMO4Q1ZYL8 232 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 LAMTOR1Q6IAA8 161 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 OR2D3Q8NGH3 330 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZNF714Q96N38 554 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 ZNF552Q9H707 407 aaPredicted RBP16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 FOXJ2Q9P0K8 574 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 FUT9Q9Y231 359 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IGHV3-21A0A0B4J1V1 117 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 hCG_38984A0A1B0GV85 526 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 OR5P3Q8WZ94 311 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 IMMP1LQ96LU5 166 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 GPHA2Q96T91 129 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 HIGD1AQ9Y241 93 aa16.02■□□□□ 0.16
CNTNAP3B-203ENST00000377561 SBF1O95248 1867 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ISLRO14498 428 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TAF15Q92804 592 aaKnown RBP eCLIP16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 FGF11Q92914 225 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ZNF703Q9H7S9 590 aaPredicted RBP16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ZNF708P17019 499 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 LOXL3P58215 753 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TLNRD1Q9H1K6 362 aa16.02■□□□□ 0.15
CNTNAP3B-203ENST00000377561 A0A1B0GTI1 187 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 BTCP35070 178 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 NSUN5P2Q63ZY6 315 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 C16orf82Q7Z2V1 217 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 LSM10Q969L4 123 aaKnown RBP16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 SMIM12Q96EX1 92 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 PITPNC1Q9UKF7 332 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TRBV23-1A0A0A0MS06 115 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ODAMA1E959 279 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 PXMP4Q9Y6I8 212 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TIMP4Q99727 224 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 SRSF9Q13242 221 aaKnown RBP eCLIP16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 SPANXN1Q5VSR9 72 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 LDLRAD3Q86YD5 345 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 MYOZ3Q8TDC0 251 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TMEM204Q9BSN7 226 aa16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
CNTNAP3B-203ENST00000377561 TMSB15BA0A087X1C1 80 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 CYB5R3P00387 301 aaPredicted RBP16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 DANCRP0C864 163 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 ZNF883P0CG24 379 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 LRRC75BQ2VPJ9 315 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 STAG3L2P0CL84 134 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 CLEC2AQ6UVW9 174 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 RHOVQ96L33 236 aa16■□□□□ 0.15
CNTNAP3B-203ENST00000377561 GP6Q9HCN6 339 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms