RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TACC2O95359 2948 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 IGLV3-9A0A075B6K5 115 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 LRRC30A6NM36 301 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 MGST3O14880 152 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 ERVFRD-1P60508 538 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 MORN2Q502X0 79 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 GFRALQ6UXV0 394 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 C1orf229Q6ZS94 237 aaPredicted RBP13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 H2BFWTQ7Z2G1 175 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 COMMD1Q8N668 190 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 SNX22Q96L94 193 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 CCL13Q99616 98 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
CNKSR1-202ENST00000374253 RAI1Q7Z5J4 1906 aaPredicted RBP13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 H7C2Y5 167 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 M0R1X1 148 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 GYPAP02724 150 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 FAM90A1Q86YD7 464 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 FAM216BQ8N7L0 139 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 DYSFO75923 2080 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 P0C879 139 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 TDGF1P3P51864 188 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 C14orf79Q96F83 325 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 HSPB7Q9UBY9 170 aa13.26□□□□□ -0.29
CNKSR1-202ENST00000374253 C7orf77A4D0Y5 90 aa13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 CLDN14O95500 239 aa13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 LHBP01229 141 aa13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 MLXQ9UH92 298 aa13.25□□□□□ -0.29
CNKSR1-202ENST00000374253 PIGBOS1A0A0B4J2F0 54 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 ARG1P05089 322 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 ADH4P08319 380 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 OR9G9P0C7N8 305 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 GZMHP20718 246 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 DUTP33316 252 aaKnown RBP13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 LOXL3P58215 753 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 SELENOVP59797 346 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 HBG1P69891 147 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 HBG2P69892 147 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 MSMO1Q15800 293 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 ADAM5Q6NVV9 412 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 QTRT1Q9BXR0 403 aaKnown RBP13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 CALYQ9NYX4 217 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 ZNRD1Q9P1U0 126 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 GNG13Q9P2W3 67 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 CEBPZOSA8MTT3 80 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 CRYBA1P05813 215 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 HTD2P86397 168 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 ZNF726P1Q15940 193 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 LFNGQ8NES3 379 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 Q8TCH9 128 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 DTD1Q8TEA8 209 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 R3HDM4Q96D70 268 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 TOLLIPQ9H0E2 274 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 RNF7Q9UBF6 113 aa13.24□□□□□ -0.29
CNKSR1-202ENST00000374253 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 ZFP92A6NM28 416 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 SOHLH1Q5JUK2 328 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 PPP1R35Q8TAP8 253 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 ZNF665Q9H7R5 613 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 NDRG3Q9UGV2 375 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 DSCAML1Q8TD84 2053 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 DEFA4P12838 97 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 GNG10P50151 68 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 TLE4Q04727 773 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 BSPH1Q075Z2 132 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 LRRC75BQ2VPJ9 315 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 CYB561D1Q8N8Q1 229 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 WDR61Q9GZS3 305 aaKnown RBP13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 COA4Q9NYJ1 87 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 DCHS2Q6V1P9 2916 aa13.23□□□□□ -0.29
CNKSR1-202ENST00000374253 TRAV3A0A0B4J244 114 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 A0A1W2PPE2 198 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 CFHR2P36980 270 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 ICAM4Q14773 271 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 TBR1Q16650 682 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 C17orf58Q2M2W7 97 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 FAM122CQ6P4D5 195 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 ZNF66Q6ZN08 573 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 EDARADDQ8WWZ3 215 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 IFI27L2Q9H2X8 130 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 KIAA1456Q9P272 454 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 ARFGEF3Q5TH69 2177 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 COLCA2A8K830 154 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 MMP23AO75900 390 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 IFNA17P01571 189 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms