RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 HSPB9Q9BQS6 159 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 C1QTNF5Q9BXJ0 243 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 AKIRIN1Q9H9L7 192 aaPredicted RBP14.86□□□□□ -0.03
PTPRU-202ENST00000373779 IL17BQ9UHF5 180 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 MARCH11A6NNE9 402 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 DIRC3C9JPN6 131 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 HOXA5P20719 270 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 Q8WTZ3 238 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 LRRC75BQ2VPJ9 315 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 K7ESF4 209 aa14.86□□□□□ -0.03
PTPRU-202ENST00000373779 TCF20Q9UGU0 1960 aaKnown RBP14.86□□□□□ -0.03
PTPRU-202ENST00000373779 LYZP61626 148 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 TNXAQ16473 311 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 LBHQ53QV2 105 aaPredicted RBP14.85□□□□□ -0.03
PTPRU-202ENST00000373779 FAM214BQ7L5A3 538 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 CA5BP1Q8WTZ4 195 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 WFDC1Q9HC57 220 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 PLAURQ03405 335 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 TRIP6Q15654 476 aaKnown RBP14.85□□□□□ -0.03
PTPRU-202ENST00000373779 PRSS3P2Q8NHM4 247 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 ZNF596Q8TC21 504 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 FAM216AQ8WUB2 273 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 FAM122AQ96E09 287 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 ARHGEF17Q96PE2 2063 aaPredicted RBP14.85□□□□□ -0.03
PTPRU-202ENST00000373779 LINC00271P0C7V0 271 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 PTTG1IPP53801 180 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 SPEM2Q0P670 501 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 CDCP2Q5VXM1 449 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 WDFY1Q8IWB7 410 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 FLYWCH2Q96CP2 140 aaKnown RBP14.85□□□□□ -0.03
PTPRU-202ENST00000373779 FREM3P0C091 2139 aa14.85□□□□□ -0.03
PTPRU-202ENST00000373779 HIST3H3Q16695 136 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 GFRALQ6UXV0 394 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 OR1L8Q8NGR8 309 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 BRWD1Q9NSI6 2320 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 UBE2CO00762 179 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 P01737 135 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 MT-ND6P03923 174 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 CLEC3BP05452 202 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 ARL14EPLP0DKL9 152 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 GAMTQ14353 236 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 PPP1R32Q7Z5V6 425 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 COLCA2A8K830 154 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
PTPRU-202ENST00000373779 FOLR2P14207 255 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 REC114Q7Z4M0 266 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 C1orf174Q8IYL3 243 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 DDA1Q9BW61 102 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 K7N7A8 449 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 ICAM4Q14773 271 aa14.84□□□□□ -0.03
PTPRU-202ENST00000373779 GSX1Q9H4S2 264 aaPredicted RBP14.84□□□□□ -0.03
PTPRU-202ENST00000373779 HIST1H1EP10412 219 aaKnown RBP14.83□□□□□ -0.03
PTPRU-202ENST00000373779 MPV17P39210 176 aa14.83□□□□□ -0.03
PTPRU-202ENST00000373779 PRRX1P54821 245 aa14.83□□□□□ -0.03
PTPRU-202ENST00000373779 SCN8AQ9UQD0 1980 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 EFNA2O43921 213 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 HIST1H1BP16401 226 aaKnown RBP14.83□□□□□ -0.04
PTPRU-202ENST00000373779 DEFB124Q8NES8 71 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 PERPQ96FX8 193 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 TMEM191AQ9H0A3 160 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 ONECUT1Q9UBC0 465 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 NRN1LQ496H8 165 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 OR8I2Q8N0Y5 310 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 MESP1Q9BRJ9 268 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 MRPL18Q9H0U6 180 aaKnown RBP14.83□□□□□ -0.04
PTPRU-202ENST00000373779 RNF24Q9Y225 148 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 KNTC1P50748 2209 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 PLXNA4Q9HCM2 1894 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 CBY3A6NI87 242 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 WNT5AP41221 380 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 QRFPP83859 136 aa14.83□□□□□ -0.04
PTPRU-202ENST00000373779 REPIN1Q9BWE0 567 aaKnown RBP14.83□□□□□ -0.04
PTPRU-202ENST00000373779 CFPP27918 469 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 LTBRP36941 435 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 MRPL14Q6P1L8 145 aaKnown RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 CYP2G1PQ6ZSU1 146 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 TMEM140Q9NV12 185 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 PLXNA2O75051 1894 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 ISLRO14498 428 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 SMPD2O60906 423 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 VENTXO95231 258 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 RPL11P62913 178 aaKnown RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 SLC35B1P78383 322 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 NHLH1Q02575 133 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 C19orf35Q6ZS72 473 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 STXBP6Q8NFX7 210 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 RND1Q92730 232 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 IMMP1LQ96LU5 166 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 MAP1BP46821 2468 aaKnown RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 A0A0G2JMM0 328 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 A0A1W2PPB8 328 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 A0A1W2PRS3 328 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 KIR3DP1A8MWS1 328 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 Q56UQ5 140 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 GCSAMQ8N6F7 178 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 LRTM2Q8N967 370 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 OR4D5Q8NGN0 318 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 KLF14Q8TD94 323 aaPredicted RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 FCER1GP30273 86 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 VOPP1Q96AW1 172 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms