RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 A8MXE2 369 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 CASP6P55212 293 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM78BQ5VT40 261 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 CARHSP1Q9Y2V2 147 aaKnown RBP14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TNCP24821 2201 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 DOPEY2Q9Y3R5 2298 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TRBV23-1A0A0A0MS06 115 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 C11orf94C9JXX5 98 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HSPB1P04792 205 aaKnown RBP14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 BCL2P10415 239 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ZNF90Q03938 601 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM27E3Q08E93 113 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MST1LQ2TV78 715 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RNF212Q495C1 297 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TAF15Q92804 592 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HSD17B10Q99714 261 aaKnown RBP14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ZNF251Q9BRH9 671 aa14.94□□□□□ -0.02
TRAF3IP1-201ENST00000373327 IGHV3-72A0A0B4J1Y9 119 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GALR1P47211 349 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RPL19P84098 196 aaKnown RBP14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 METRNQ9UJH8 293 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 IGKV1-6A0A0C4DH72 117 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ZNF891A8MT65 544 aaPredicted RBP14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 EIF2S3P41091 472 aaKnown RBP14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TNFRSF9Q07011 255 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HES1Q14469 280 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 PKIBQ9C010 78 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 BARX1Q9HBU1 254 aaPredicted RBP14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 IL36GQ9NZH8 169 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM208BQ5VWN6 2430 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MALRD1Q5VYJ5 2156 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A10PA6NDY2 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A18PA6NE21 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A16PA6NEW6 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A20PA6NIJ5 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A8PA6NJQ4 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A7PA6NKC0 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A22PA8MWA6 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A12PA8MX19 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A5PA8MXJ8 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A23PA8MXZ1 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 APOA2P02652 100 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A15PP0C7V4 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A13PP0C7W8 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A14PP0C7W9 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A24PP0C7X0 464 aa14.93□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ODAMA1E959 279 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MARCH11A6NNE9 402 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 F6UZH7 168 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 COX5BP10606 129 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 HOXA6P31267 233 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RCC1LQ96I51 464 aaKnown RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RHOVQ96L33 236 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RAB9BQ9NP90 201 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 PTBP3O95758 552 aaKnown RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 S100A8P05109 93 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TCL1AP56279 114 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TMEM42Q69YG0 159 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 Q6ZRM9 215 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 Q6ZT83 130 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 BAGE3Q86Y29 109 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 BAGE2Q86Y30 109 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM90A27PA6NNH2 459 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 CDX4O14627 284 aaPredicted RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 H1FOOQ8IZA3 346 aaPredicted RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 VAX2Q9UIW0 290 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM3BP58499 235 aaPredicted RBP14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RTP5Q14D33 572 aa14.92□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RPS23P62266 143 aaKnown RBP14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TFF3Q07654 80 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GTF3AQ92664 365 aaKnown RBP14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 EGLN1Q9GZT9 426 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 THBS3P49746 956 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 SLC35B1P78383 322 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MIC13Q5XKP0 118 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 SAXO1Q8IYX7 474 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 OR4D5Q8NGN0 318 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 DKK1O94907 266 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 MBP02144 154 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 COX7A1P24310 79 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RTL8BQ17RB0 113 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 RAB24Q969Q5 203 aa14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 USB1Q9BQ65 265 aaKnown RBP14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 FAM103A1Q9BTL3 118 aaKnown RBP14.91□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ANKHD1Q8IWZ3 2542 aaKnown RBP14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 PRR33A8MZF0 331 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 OR4P4Q8NGL7 312 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TPPP3Q9BW30 176 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GPR61Q9BZJ8 451 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TSTD3H0UI37 97 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 TMEM50AO95807 157 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 ZNF645Q8N7E2 425 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 QTRT1Q9BXR0 403 aaKnown RBP14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 IFT22Q9H7X7 185 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 SLC35D1Q9NTN3 355 aa14.9□□□□□ -0.02
TRAF3IP1-201ENST00000373327 GZMHP20718 246 aa14.89□□□□□ -0.03
TRAF3IP1-201ENST00000373327 IGKV3D-15A0A087WSY6 115 aa14.89□□□□□ -0.03
TRAF3IP1-201ENST00000373327 WISP2O76076 250 aa14.89□□□□□ -0.03
TRAF3IP1-201ENST00000373327 CNIH1O95406 144 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms