RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 EDDM3AQ14507 147 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CDK10Q15131 360 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 CARTPTQ16568 116 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SRSF7Q16629 238 aaKnown RBP eCLIP2.91□□□□□ -1.94
MCF2-202ENST00000370573 METTL11BQ5VVY1 283 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF660Q6AZW8 331 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 FAM53AQ6NSI3 398 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF841Q6ZN19 808 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 Q6ZS49 121 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 TCF23Q7RTU1 214 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 FOXRED2Q8IWF2 684 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 SLC38A6Q8IZM9 456 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ZNF525Q8N782 197 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 DUSP18Q8NEJ0 188 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 TMEM185AQ8NFB2 350 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 OR5AP2Q8NGF4 316 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 OR51S1Q8NGJ8 323 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 OR13A1Q8NGR1 328 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MRGPRFQ96AM1 343 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 DAZAP1Q96EP5 407 aaKnown RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 FAM234AQ9H0X4 552 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 MMP28Q9H239 520 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 DPAGT1Q9H3H5 408 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 RIMS4Q9H426 269 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 MYOZ1Q9NP98 299 aaPredicted RBP2.91□□□□□ -1.94
MCF2-202ENST00000370573 TAS2R8Q9NYW2 309 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ANXA10Q9UJ72 324 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 FLVCR2Q9UPI3 526 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 NAV2Q8IVL1 2488 aa2.91□□□□□ -1.94
MCF2-202ENST00000370573 ARHGAP32A7KAX9 2087 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 DSCAML1Q8TD84 2053 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 MEIKINA0A087WXM9 373 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 FAM240BA0A1B0GVZ2 78 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 ODAMA1E959 279 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 NAP1L6A6NFF2 107 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 CEACAM18A8MTB9 384 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 C12orf77C9JDV5 145 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 RHODO00212 210 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 FABP7O15540 132 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 PTTG1O95997 202 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 WNT2P09544 360 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 PAX1P15863 534 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 ERP29P30040 261 aaKnown RBP2.9□□□□□ -1.94
MCF2-202ENST00000370573 SSTR2P30874 369 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 TAGLN2P37802 199 aaKnown RBP2.9□□□□□ -1.94
MCF2-202ENST00000370573 KCNJ3P48549 501 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 AP3S2P59780 193 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 SEC61A1P61619 476 aaKnown RBP2.9□□□□□ -1.94
MCF2-202ENST00000370573 BLOC1S1P78537 153 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 HMGN3Q15651 99 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 Q3ZCU0 254 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 CHRFAM7AQ494W8 412 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 VAX1Q5SQQ9 334 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 UTF1Q5T230 341 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 ASPHD1Q5U4P2 390 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 BTNL8Q6UX41 500 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 STX12Q86Y82 276 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 OR5D13Q8NGL4 314 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 OR13C8Q8NGS7 320 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 OR5H2Q8NGV7 314 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 OR1L1Q8NH94 360 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 RFESDQ8TAC1 157 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 MRGPRDQ8TDS7 321 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 RAB1CQ92928 201 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 RITA1Q96K30 269 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 RBM14Q96PK6 669 aaKnown RBP2.9□□□□□ -1.94
MCF2-202ENST00000370573 C7orf50Q9BRJ6 194 aaKnown RBP2.9□□□□□ -1.94
MCF2-202ENST00000370573 DNTTIP1Q9H147 329 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 NCOR1P1Q9H4R4 102 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 NARFLQ9H6Q4 476 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 TAF9BQ9HBM6 251 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 ZNF286AQ9HBT8 521 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 ZC4H2Q9NQZ6 224 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 C19orf12Q9NSK7 152 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 MCUBQ9NWR8 336 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 TRAPPC2LQ9UL33 140 aa2.9□□□□□ -1.94
MCF2-202ENST00000370573 OR5H14A6NHG9 310 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 NKX6-3A6NJ46 265 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 CENPXA8MT69 81 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 C15orf65H3BRN8 121 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 H7C1Q1 480 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 NDUFB3O43676 98 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 TCRBP04435 133 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 CSN3P07498 182 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 OR5H8P0DN80 308 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 SPP1P10451 314 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 TBPP20226 339 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 SSTR5P35346 364 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 GPR6P46095 362 aaPredicted RBP2.9□□□□□ -1.95
MCF2-202ENST00000370573 OR3A3P47888 321 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 ATP5J2P56134 94 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 EDDM3BP56851 147 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 TAS2R46P59540 309 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 LMO4P61968 165 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 HLA-DRB3P79483 266 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 KRTAP1-1Q07627 177 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 MEF2DQ14814 521 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 C17orf58Q2M2W7 97 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms