RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 Q6ZT83 130 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 TRIB1Q96RU8 372 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 P2RX4Q99571 388 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 KCNIP1Q9NZI2 227 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 URB1O60287 2271 aaKnown RBP12.15□□□□□ -0.46
ARHGEF1-202ENST00000347545 OOEPA6NGQ2 149 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 ZG16O60844 167 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 MDKP21741 143 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 SOX8P57073 446 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 HCFC1P51610 2035 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 A0A087X0M5 115 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 A0A1B0GX30 115 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 ZNF737O75373 536 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 CASP6P55212 293 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 TGFBR3Q03167 851 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 USF2Q15853 346 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 FAM214BQ7L5A3 538 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 ZBTB34Q8NCN2 500 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 OR13A1Q8NGR1 328 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 FRZBQ92765 325 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 DCTN5Q9BTE1 182 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 CACNA1DQ01668 2161 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 IL2RGP31785 369 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 KIR2DL2P43627 348 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 PMS2P11Q13670 270 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 TMEM178AQ8NBL3 297 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 MISP3Q96FF7 219 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 FAM210BQ96KR6 192 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
ARHGEF1-202ENST00000347545 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 M0R296 226 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 IGHG3P01860 377 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 COX5AP20674 150 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 LHX4Q969G2 390 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 DEFA4P12838 97 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 COL10A1Q03692 680 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 SSX2Q16385 188 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
ARHGEF1-202ENST00000347545 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 DDTP30046 118 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 GABRA2P47869 451 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CNEP1R1Q8N9A8 125 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CLDN34H7C241 214 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 SNRPCP09234 159 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CECR9P0C854 216 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 HIST1H1BP16401 226 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 FOXF2Q12947 444 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CD177Q8N6Q3 437 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 Q8N7P7 452 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 RFESDQ8TAC1 157 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 TMEM147Q9BVK8 224 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 C15orf65H3BRN8 121 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 PROP1O75360 226 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CLDN14O95500 239 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 MSMO1Q15800 293 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 VWC2Q2TAL6 325 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 MRPL37Q9BZE1 423 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-202ENST00000347545 CACNA1GO43497 2377 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 SLC31A2O15432 143 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 NKX2-8O15522 239 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 FGF7P21781 194 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 RAB29O14966 203 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 KITLGP21583 273 aa12.11□□□□□ -0.47
ARHGEF1-202ENST00000347545 EGR1P18146 543 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 TGIF2LXQ8IUE1 241 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 INTS1Q8N201 2190 aaKnown RBP12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 IFNA1P01562 189 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 FABP6P51161 128 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 CATR1Q13166 79 aa12.1□□□□□ -0.47
ARHGEF1-202ENST00000347545 FFAR4Q5NUL3 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms