RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MSMO1Q15800 293 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 CEACAM21Q3KPI0 293 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 PXMP4Q9Y6I8 212 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 GJE1A6NN92 205 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 S1PR2O95136 353 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 IGHV3-13P01766 116 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 BRS3P32247 399 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 OR5AU1Q8NGC0 362 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 RNF138Q8WVD3 245 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 SFRP2Q96HF1 295 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 CBR3O75828 277 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 NTF3P20783 257 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 CD82P27701 267 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 RAB7AP51149 207 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 PCOLCEQ15113 449 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 RFESDQ8TAC1 157 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
COL6A2-201ENST00000300527 PROK2Q9HC23 129 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 ODAMA1E959 279 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 M0QZK8 103 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 SYNGR4O95473 234 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 OTX2P32243 289 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 RPL15P61313 204 aaKnown RBP12.37□□□□□ -0.43
COL6A2-201ENST00000300527 ALKBH2Q6NS38 261 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 CXorf67Q86X51 503 aaPredicted RBP12.37□□□□□ -0.43
COL6A2-201ENST00000300527 LSM10Q969L4 123 aaKnown RBP12.37□□□□□ -0.43
COL6A2-201ENST00000300527 CIB3Q96Q77 187 aaPredicted RBP12.37□□□□□ -0.43
COL6A2-201ENST00000300527 ZNF391Q9UJN7 358 aa12.37□□□□□ -0.43
COL6A2-201ENST00000300527 ERASQ7Z444 233 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 SNURFLB1AK76 121 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 CHRNB4P30926 498 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 SOX8P57073 446 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 RNF151Q2KHN1 245 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
COL6A2-201ENST00000300527 TPRX1Q8N7U7 411 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 DEPPQ9NTK1 212 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 GTF3C1Q12789 2109 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 GRPP07492 148 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 RAC2P15153 192 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 SVILO95425 2214 aa12.36□□□□□ -0.43
COL6A2-201ENST00000300527 IGHEP01854 428 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 RPL30P62888 115 aaKnown RBP12.35□□□□□ -0.43
COL6A2-201ENST00000300527 HTD2P86397 168 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 WNT10AQ9GZT5 417 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 IGHV5-10-1A0A0J9YXX1 117 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 NXPH2O95156 264 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 AMTP48728 403 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 LCN2P80188 198 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 HLA-DRB5Q30154 266 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 PDLIM3Q53GG5 364 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-201ENST00000300527 TMEM14EPQ6UXP3 125 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
COL6A2-201ENST00000300527 C1QTNF5Q9BXJ0 243 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 RIMS4Q9H426 269 aaPredicted RBP12.35□□□□□ -0.43
COL6A2-201ENST00000300527 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 DIRC3C9JPN6 131 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 TNFSF13O75888 250 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 Q6ZN92 141 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
COL6A2-201ENST00000300527 OCC1Q8TAD7 63 aa12.35□□□□□ -0.43
COL6A2-201ENST00000300527 C17orf98A8MV24 154 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 SH2D1BO14796 132 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 TYMSP04818 313 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-201ENST00000300527 HIPK2Q9H2X6 1198 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 C17orf112F2Z3M2 114 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 SF3B5Q9BWJ5 86 aaKnown RBP12.34□□□□□ -0.43
COL6A2-201ENST00000300527 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-201ENST00000300527 TRBV20OR9-2A0A075B6H5 130 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 LRP5LA4QPB2 252 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A10PA6NDY2 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A8PA6NJQ4 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A7PA6NKC0 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A22PA8MWA6 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms