RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 LRRK1Q38SD2 2015 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 GAPDHP04406 335 aaKnown RBP10.51□□□□□ -0.73
PCF11-201ENST00000298281 CISD3P0C7P0 127 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 EFNB1P98172 346 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 HIST1H1AQ02539 215 aaPredicted RBP10.51□□□□□ -0.73
PCF11-201ENST00000298281 OR8B12Q8NGG6 310 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 ZNF48Q96MX3 618 aaPredicted RBP10.51□□□□□ -0.73
PCF11-201ENST00000298281 AICDAQ9GZX7 198 aa10.51□□□□□ -0.73
PCF11-201ENST00000298281 CDIPTO14735 213 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 SYNGR1O43759 233 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 OR2A4O95047 310 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 LINC01555Q8NAE3 123 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 OR2A7Q96R45 310 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 A0A1W2PPE3 182 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 CD8AP01732 235 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 HOXD4P09016 255 aaPredicted RBP10.5□□□□□ -0.73
PCF11-201ENST00000298281 CTGFP29279 349 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 EFNB2P52799 333 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 TAF1P21675 1872 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 IGHV3-66A0A0C4DH42 116 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 J3QT63 122 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 NCMAPQ5T1S8 102 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 TSPO2Q5TGU0 170 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 TMEM42Q69YG0 159 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 RASL10BQ96S79 203 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 HBZP02008 142 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 ISG15P05161 165 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 HBBP68871 147 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 C9orf50Q5SZB4 431 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 ALG14Q96F25 216 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 OR8D4Q8NGM9 314 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 CT55Q8WUE5 264 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 KIF13BQ9NQT8 1826 aa10.5□□□□□ -0.73
PCF11-201ENST00000298281 PKDREJQ9NTG1 2253 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 INSP01308 110 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 DAOP14920 347 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PWWP2BQ6NUJ5 590 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 SHISA5Q8N114 240 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PPIAL4EA0A075B759 164 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PPIAL4DF5H284 164 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PPIAL4FP0DN26 164 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 CKS1BP61024 79 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 FAM216AQ8WUB2 273 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 LIPT2A6NK58 231 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 SCMH1Q96GD3 660 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
PCF11-201ENST00000298281 IL19Q9UHD0 177 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 NOTCH3Q9UM47 2321 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 H7C1H1 209 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 COL10A1Q03692 680 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 A0A1B0GTL3 188 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 OGG1O15527 345 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 NAT2P11245 290 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 MUC1P15941 1255 aaPredicted RBP10.49□□□□□ -0.73
PCF11-201ENST00000298281 MAGEA5P43359 124 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PDLIM4P50479 330 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PSG9Q00887 426 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 MRGPRGQ86SM5 289 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 APOMO95445 188 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 HIST1H4AP62805 103 aaKnown RBP10.49□□□□□ -0.73
PCF11-201ENST00000298281 DCAF12L2Q5VW00 463 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 C12orf54Q6X4T0 127 aa10.49□□□□□ -0.73
PCF11-201ENST00000298281 PITX3O75364 302 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 ADAP1O75689 374 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 CCL8P80075 99 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 SRSF6Q13247 344 aaKnown RBP10.48□□□□□ -0.73
PCF11-201ENST00000298281 FOXB2Q5VYV0 432 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 SELENOHQ8IZQ5 122 aaKnown RBP10.48□□□□□ -0.73
PCF11-201ENST00000298281 WDR54Q9H977 334 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 SLC25A15Q9Y619 301 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 F8WEM9 126 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 REG1AP05451 166 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 CGB7P0DN87 165 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 TCF24Q7RTU0 167 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 SMDT1Q9H4I9 107 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 PPYP01298 95 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 CD69Q07108 199 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 ZIC1Q15915 447 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 DMKNQ6E0U4 476 aaPredicted RBP10.48□□□□□ -0.73
PCF11-201ENST00000298281 SLC25A2Q9BXI2 301 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 TMEM229AB2RXF0 380 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 PAX2Q02962 417 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 SRSF5Q13243 272 aaKnown RBP10.48□□□□□ -0.73
PCF11-201ENST00000298281 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 ASCL4Q6XD76 172 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 STPG2Q8N412 459 aa10.48□□□□□ -0.73
PCF11-201ENST00000298281 VSTM2LQ96N03 204 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms