RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 FAM19A2Q8N3H0 131 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 OPRK1P41145 380 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 GCSAMLQ5JQS6 135 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 DOLPP1Q86YN1 238 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 CLEC1BQ9P126 229 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 IGHMP01871 453 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 ARL14EPLP0DKL9 152 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 ST6GALNAC6Q969X2 333 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 A0A1B0GUS0 222 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 RPL23P62829 140 aaKnown RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 OR2Y1Q8NGV0 311 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 SLC25A40Q8TBP6 338 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 ZNF891A8MT65 544 aaPredicted RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 SLC25A5P05141 298 aaKnown RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 FOLR2P14207 255 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 TNFSF4P23510 183 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 CD82P27701 267 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 TNFRSF9Q07011 255 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 CEACAM21Q3KPI0 293 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 NDUFAF3Q9BU61 184 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 TM2D1Q9BX74 207 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 SH2D2AQ9NP31 389 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 PRRC2CQ9Y520 2896 aaKnown RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 J3QT63 122 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 NAPSAO96009 420 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 OR4A8P0C604 315 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 PRB4P10163 310 aaPredicted RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 ZNF83P51522 516 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 CD81P60033 236 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 CADM4Q8NFZ8 388 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
USP43-201ENST00000285199 MPC1Q9Y5U8 109 aa13.41□□□□□ -0.26
USP43-201ENST00000285199 TNFSF10P50591 281 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 ERHP84090 104 aaKnown RBP13.4□□□□□ -0.26
USP43-201ENST00000285199 MOB1BQ7L9L4 216 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 MDP1Q86V88 176 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 FAM89BQ8N5H3 189 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 OR10X1Q8NGY0 326 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 DYNLRB1Q9NP97 96 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 H3BTX0 84 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 CNIH1O95406 144 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 HBZP02008 142 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 EPHA8P29322 1005 aaPredicted RBP13.4□□□□□ -0.26
USP43-201ENST00000285199 SRIP30626 198 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 REG1BP48304 166 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 QRFPP83859 136 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 SF3B5Q9BWJ5 86 aaKnown RBP13.4□□□□□ -0.26
USP43-201ENST00000285199 UBE2ZQ9H832 354 aaPredicted RBP13.4□□□□□ -0.26
USP43-201ENST00000285199 CRYBB3P26998 211 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 SPEM2Q0P670 501 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 LAMA3Q16787 3333 aa13.4□□□□□ -0.26
USP43-201ENST00000285199 PDE6DO43924 150 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 BRS3P32247 399 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 CISD2Q8N5K1 135 aaKnown RBP13.39□□□□□ -0.27
USP43-201ENST00000285199 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 M0QZK8 103 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 WNT9BO14905 357 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 GGCTO75223 188 aaKnown RBP13.39□□□□□ -0.27
USP43-201ENST00000285199 TMEM256Q8N2U0 113 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 IGHEP01854 428 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 UCP1P25874 307 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 WDR74Q6RFH5 385 aaPredicted RBP13.39□□□□□ -0.27
USP43-201ENST00000285199 CORO2AQ92828 525 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 WDFY1Q8IWB7 410 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 ZNF664Q8N3J9 261 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 WBP1Q96G27 269 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 RNF2Q99496 336 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 SLC45A2Q9UMX9 530 aa13.39□□□□□ -0.27
USP43-201ENST00000285199 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 RRHO14718 337 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 IGHV2-70P01814 119 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CT45A6P0DMU7 189 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CT45A5P0DMU8 189 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CT45A7P0DMV0 189 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CHRNB4P30926 498 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 SSTR5P35346 364 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 NUBP1P53384 320 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 UCP3P55916 312 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 HES1Q14469 280 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CT45A1Q5HYN5 189 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CYP2G1PQ6ZSU1 146 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 MUC15Q8N387 334 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 CT45A3Q8NHU0 189 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 HES4Q9HCC6 221 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 PMS2P1A4D2B8 440 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 SPCS3P61009 180 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 JOSD1Q15040 202 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms