RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 RCC1P18754 421 aaPredicted RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 ZBTB34Q8NCN2 500 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 RPL36A-HNRNPH2H7BZ11 118 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 DSPPQ9NZW4 1301 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV1OR15-9A0A0B4J2B8 117 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 J3QT63 122 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 VSIG10L2P0DP72 767 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 UCNP55089 124 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 FBXW9Q5XUX1 488 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 C18orf15Q96N68 181 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 A1L4Q6 167 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 CRPP02741 224 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 CCL3P10147 92 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 NKG7Q16617 165 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 Q6ZNB5 142 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 LINC01587Q99440 93 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 SERGEFQ9UGK8 458 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 ATAD5Q96QE3 1844 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 LOC105371242A0A075B767 164 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 LIPT2A6NK58 231 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 CYB5R3P00387 301 aaPredicted RBP9.88□□□□□ -0.83
PTPN4-201ENST00000263708 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 MGAT2Q10469 447 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 KIR3DL3Q8N743 410 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 ST6GAL2Q96JF0 529 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
PTPN4-201ENST00000263708 RRHO14718 337 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 PCSK4Q6UW60 755 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 BIVMQ86UB2 503 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 TLNRD1Q9H1K6 362 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 NPPCP23582 126 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 SF3B5Q9BWJ5 86 aaKnown RBP9.87□□□□□ -0.83
PTPN4-201ENST00000263708 M0R381 172 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 CCL4P13236 92 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 LSM6P62312 80 aaKnown RBP9.87□□□□□ -0.83
PTPN4-201ENST00000263708 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3-35A0A0C4DH35 117 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 HLA-DRB1P01911 266 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 MC5RP33032 325 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 FAM206AQ9NX38 181 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 NKX2-8O15522 239 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 PDLIM4P50479 330 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 OR10S1Q8NGN2 331 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 TUBGCP6Q96RT7 1819 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV5-10-1A0A0J9YXX1 117 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 H7C1H1 209 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 CBLN3Q6UW01 205 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 MRM2Q9UI43 246 aaKnown RBP9.87□□□□□ -0.83
PTPN4-201ENST00000263708 NDUFA3O95167 84 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 LHX8Q68G74 356 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 KIF13BQ9NQT8 1826 aa9.87□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 NAT1P18440 290 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 MYEOVQ96EZ4 313 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 C1orf162Q8NEQ5 155 aaPredicted RBP9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TNFRSF12AQ9NP84 129 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 UQCR10Q9UDW1 63 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 CT62P0C5K7 136 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 HBBP68871 147 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 RHOVQ96L33 236 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM106BQ9NUM4 274 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 ZNHIT1O43257 154 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TTTY12Q9BZ98 90 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF430Q9H8G1 570 aaPredicted RBP9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM250H0YL14 139 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 MVDP53602 400 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 SCAND1P57086 179 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 CRHP06850 196 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 DCAF12L2Q5VW00 463 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 KCNK17Q96T54 332 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 RPS11P62280 158 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPN4-201ENST00000263708 PMCHL1Q16048 86 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TRAF4Q9BUZ4 470 aaPredicted RBP9.86□□□□□ -0.83
PTPN4-201ENST00000263708 IGHV3-48P01763 117 aa9.86□□□□□ -0.83
PTPN4-201ENST00000263708 TYMSP04818 313 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 SURF2Q15527 256 aaPredicted RBP9.85□□□□□ -0.83
PTPN4-201ENST00000263708 MESTQ5EB52 335 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 CADP27708 2225 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 BCL2P10415 239 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 CRYGNQ8WXF5 182 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 IGLV3-27P01718 113 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM42Q69YG0 159 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 AICDAQ9GZX7 198 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TRGV3P03979 118 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 LEAP2Q969E1 77 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TRAV30A0A087WSZ9 112 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 PPIAL4CA0A0B4J2A2 164 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 PPIAL4GP0DN37 164 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 GOLT1AQ6ZVE7 132 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 TMEM45BQ96B21 275 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 MRPS18BQ9Y676 258 aaKnown RBP9.85□□□□□ -0.83
PTPN4-201ENST00000263708 CHD3Q12873 2000 aaKnown RBP9.85□□□□□ -0.83
PTPN4-201ENST00000263708 GALP22466 123 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms