RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 SNHG12Q9BXW3 62 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 CBLN4Q9NTU7 201 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 MPC1Q9Y5U8 109 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 PCSK5Q92824 1860 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 IGKV3D-15A0A087WSY6 115 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 OR5B21A6NL26 309 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 DEFB108AA8MXU0 73 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 J3QT63 122 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 ATP5G3P48201 142 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 PCP4P48539 62 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 MCEMP1Q8IX19 187 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 OR2M7Q8NG81 312 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 OR10P1Q8NGE3 313 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 CT55Q8WUE5 264 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 BOKQ9UMX3 212 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-201ENST00000262395 LRP5LA4QPB2 252 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 PSPNO60542 156 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 LINC00596Q86U02 117 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 MDP1Q86V88 176 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 DTD1Q8TEA8 209 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 NPCDR1Q9BY65 106 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 LINC00470Q9BZP3 86 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 KNTC1P50748 2209 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 TNRC6BQ9UPQ9 1833 aaKnown RBP15.09■□□□□ 0.01
TRAF4-201ENST00000262395 ZNF320A2RRD8 509 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM250H0YL14 139 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 WNT9BO14905 357 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 NUPR1O60356 82 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 C1QTNF9P0C862 333 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 PAX1P15863 534 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 HOXA6P31267 233 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 ARR3P36575 388 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 PAX5Q02548 391 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 LTC4SQ16873 150 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 TCF23Q7RTU1 214 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 ZNF709Q8N972 641 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 ZNF114Q8NC26 417 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 RFESDQ8TAC1 157 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 NEIL1Q96FI4 390 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM147Q9BVK8 224 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 OR6C3Q9NZP0 311 aa15.09■□□□□ 0.01
TRAF4-201ENST00000262395 B4E171 279 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 NTN3O00634 580 aaPredicted RBP15.08■□□□□ 0
TRAF4-201ENST00000262395 TSPAN7P41732 249 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 EDDM3BP56851 147 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 AESQ08117 197 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 NRN1LQ496H8 165 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 TEX38Q6PEX7 206 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 ZNF826PQ6ZT77 177 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 OR2J1Q9GZK6 312 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 ZNF703Q9H7S9 590 aaPredicted RBP15.08■□□□□ 0
TRAF4-201ENST00000262395 HSPB7Q9UBY9 170 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 MED13Q9UHV7 2174 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 LRRC30A6NM36 301 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 NDUFB4O95168 129 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 COX5AP20674 150 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 IL3RAP26951 378 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 TGIF2LYQ8IUE0 185 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 TMEM18Q96B42 140 aa15.08■□□□□ 0
TRAF4-201ENST00000262395 NEURL1O76050 574 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 BRWD1-AS2P59051 145 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 TMEM105Q8N8V8 129 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 STRADBQ9C0K7 418 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 PATZ1Q9HBE1 687 aaKnown RBP15.07■□□□□ 0
TRAF4-201ENST00000262395 PDGFBP01127 241 aaPredicted RBP15.07■□□□□ 0
TRAF4-201ENST00000262395 PMS2CLQ68D20 193 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 TDHQ8IZJ6 230 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 IL17BQ9UHF5 180 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 LOC400499M0QZD8 3231 aa15.07■□□□□ 0
TRAF4-201ENST00000262395 LPAL2Q16609 132 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 ACSF3Q4G176 576 aaPredicted RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 PMS2P5A8MQ11 134 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 C12orf77C9JDV5 145 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 NPIPB11E5RHQ5 1161 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 GCGP01275 180 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 CNN1P51911 297 aaKnown RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 GNB1P62873 340 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 PLGLB1Q02325 96 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 COA6Q5JTJ3 125 aaKnown RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 CENPVQ7Z7K6 275 aaPredicted RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 MRGPRDQ8TDS7 321 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 ACY3Q96HD9 319 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 PKIBQ9C010 78 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 TIMM9Q9Y5J7 89 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 TRAPPC1Q9Y5R8 145 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 ZDBF2Q9HCK1 2354 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 GRIFINA4D1Z8 144 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 IGHV3-13P01766 116 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 IGHV3-7P01780 117 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 SERPINA7P05543 415 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 RAC2P15153 192 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 CDC34P49427 236 aaPredicted RBP15.06■□□□□ 0
TRAF4-201ENST00000262395 BEND2Q8NDZ0 799 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 RTL8AQ9BWD3 113 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 FAM234AQ9H0X4 552 aa15.06■□□□□ 0
TRAF4-201ENST00000262395 SH2D1BO14796 132 aa15.05■□□□□ 0
TRAF4-201ENST00000262395 GGCTO75223 188 aaKnown RBP15.05■□□□□ 0
TRAF4-201ENST00000262395 GCH1P30793 250 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms