RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TSPAN2O60636 221 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 DLEU1O43261 78 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 GCSHP23434 173 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
HCFC2-201ENST00000229330 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
HCFC2-201ENST00000229330 CEBPDP49716 269 aaPredicted RBP11.88□□□□□ -0.51
HCFC2-201ENST00000229330 IZUMO4Q1ZYL8 232 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 GTF3AQ92664 365 aaKnown RBP11.88□□□□□ -0.51
HCFC2-201ENST00000229330 CYTL1Q9NRR1 136 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 S1PR2O95136 353 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 CXCL1P09341 107 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 CLDN18P56856 261 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 EGR4Q05215 589 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
HCFC2-201ENST00000229330 IGHMP01871 453 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 SMIM10L1P0DMW3 83 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 HERVK_113P61574 105 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 DOLPP1Q86YN1 238 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 SMIM10Q96HG1 83 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 J3QR06 171 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 MPZP25189 248 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 A6NNC1 897 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 NDUFB3O43676 98 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 IGFBP3P17936 291 aaPredicted RBP11.87□□□□□ -0.51
HCFC2-201ENST00000229330 ACP1P24666 158 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
HCFC2-201ENST00000229330 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 GUCD1Q96NT3 240 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 MYO16Q9Y6X6 1858 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 AMBPP02760 352 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 LINC00869P0C866 280 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 ZNF645Q8N7E2 425 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 SMOC1Q9H4F8 434 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 MST1P26927 711 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 CRYBB3P26998 211 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 HES3Q5TGS1 186 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
HCFC2-201ENST00000229330 hADV38S2A0JD32 116 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 K7N7A8 449 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 NUDT3O95989 172 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 ZG16O60844 167 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 DNLZQ5SXM8 178 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 MRPL37Q9BZE1 423 aaKnown RBP11.86□□□□□ -0.51
HCFC2-201ENST00000229330 K7ESF4 209 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 PSG4Q00888 419 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 MUC15Q8N387 334 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 R4GN57 208 aa11.86□□□□□ -0.51
HCFC2-201ENST00000229330 MT-CO3P00414 261 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 LINC00614P0C842 121 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 SPEM2Q0P670 501 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 KCNS1Q96KK3 526 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 DNPH1O43598 174 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 SERF1AO75920 110 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 ADCYAP1P18509 176 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 FBLN7Q53RD9 439 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 NFAM1Q8NET5 270 aaPredicted RBP11.85□□□□□ -0.51
HCFC2-201ENST00000229330 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 CLEC1BQ9P126 229 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TRGV5A0A0B4J1U4 118 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TINAGQ9UJW2 476 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 KLF7O75840 302 aaPredicted RBP11.85□□□□□ -0.51
HCFC2-201ENST00000229330 PRNTQ86SH4 94 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 NUBP1P53384 320 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 CCL20P78556 96 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
HCFC2-201ENST00000229330 PLXNA1Q9UIW2 1896 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 CLDN14O95500 239 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 IGHV4-34P06331 123 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM242Q9NWH2 141 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 ZNF236Q9UL36 1845 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 LTBP1Q14766 1721 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 ARID2Q68CP9 1835 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 ORM1P02763 201 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 ARF6P62330 175 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TNXAQ16473 311 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms