RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TMEM155Q4W5P6 130 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 ESCO2Q56NI9 601 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF66Q6ZN08 573 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 TCTEX1D1Q8N7M0 179 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 H1FXQ92522 213 aaKnown RBP7.34□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF714Q96N38 554 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 CHODLQ9H9P2 273 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 FAM212BQ9NTI7 297 aaPredicted RBP7.34□□□□□ -1.23
CCDC47-207ENST00000612558 ZFP57Q9NU63 452 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 SDHAF2Q9NX18 166 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 TNFSF18Q9UNG2 199 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 GAB2Q9UQC2 676 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
CCDC47-207ENST00000612558 LRBAP50851 2863 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 TRBV23-1A0A0A0MS06 115 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 A0A0D9SG52 128 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RGS13O14921 159 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 PPIHO43447 177 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 LY6HO94772 140 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RNF224P0DH78 156 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 LYL1P12980 280 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 NFYBP25208 207 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 SSTR2P30874 369 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 S100A11P31949 105 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CDKN1AP38936 164 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF134P52741 427 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 TLE4Q04727 773 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RAB32Q13637 225 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF273Q14593 569 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 NMSQ5H8A3 153 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 PRSS54Q6PEW0 395 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 HEPN1Q6WQI6 88 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ACOT7LQ6ZUV0 252 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 TMUB2Q71RG4 321 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ABHD14BQ96IU4 210 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 HSD17B10Q99714 261 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 SPIN2AQ99865 258 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 SPIN2BQ9BPZ2 258 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ABHD14AQ9BUJ0 271 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 MBD2Q9UBB5 411 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 MIOXQ9UGB7 285 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RPUSD1Q9UJJ7 312 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RALYQ9UKM9 306 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 PAIP2BQ9ULR5 123 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 H0YIZ8 118 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RAB29O14966 203 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 TSC22D2O75157 780 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OR2F2O95006 317 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CLDN1O95832 211 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RLN2P04090 185 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 EFNA4P52798 201 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 S100A10P60903 97 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RPL30P62888 115 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OR2F1Q13607 317 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF345Q14585 488 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 SMCO1Q147U7 214 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OPCMLQ14982 345 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 Q3ZCU0 254 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF585BQ52M93 769 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CT45A1Q5HYN5 189 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 AVPI1Q5T686 147 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 PRAMEF5Q5TYX0 476 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF841Q6ZN19 808 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 INO80EQ8NBZ0 244 aaPredicted RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OR8B3Q8NGG8 313 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 CT45A3Q8NHU0 189 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 LSM10Q969L4 123 aaKnown RBP7.33□□□□□ -1.24
CCDC47-207ENST00000612558 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 C5orf30Q96GV9 206 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OR8B2Q96RD0 313 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 IFI27L2Q9H2X8 130 aa7.33□□□□□ -1.24
CCDC47-207ENST00000612558 OVOL3O00110 214 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 SLC31A2O15432 143 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 PROP1O75360 226 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 MMP23AO75900 390 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 IGKV1-39P01597 117 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 IGHV3-7P01780 117 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 MBPP02686 304 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 IGKV1D-39P04432 117 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 SLC25A6P12236 298 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 CCL3L1P16619 93 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 LPAR6P43657 344 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 AP2S1P53680 142 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 THOC7Q6I9Y2 204 aaKnown RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 BTNL3Q6UXE8 466 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 SPAG16Q8N0X2 631 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF439Q8NDP4 499 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 OR4D5Q8NGN0 318 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 CD300LFQ8TDQ1 290 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 TCTEX1D2Q8WW35 142 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 DCUN1D4Q92564 292 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 LEAP2Q969E1 77 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 627 ms