RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 PAX5Q02548 391 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 RBPJQ06330 500 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 PMS2CLQ68D20 193 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FDX2Q6P4F2 183 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 BHLHA15Q7RTS1 189 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 CARFQ8N187 725 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ABHD12Q8N2K0 398 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 OR2D3Q8NGH3 330 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 OR10G8Q8NGN5 311 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 C10orf35Q96D05 121 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 BOD1Q96IK1 185 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 EAF1Q96JC9 268 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 TNFRSF19Q9NS68 423 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 LYRM2Q9NU23 88 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 RALYQ9UKM9 306 aaKnown RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 VPS13CQ709C8 3753 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ATMQ13315 3056 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 IGKV3-7A0A075B6H7 116 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 IGHMP01871 453 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 TRGC1P0CF51 173 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 CT45A10P0DMU9 189 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 PRF1P14222 555 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FOSL1P15407 271 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 UCP2P55851 309 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 RPS23P62266 143 aaKnown RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 RHOBP62745 196 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 RANP62826 216 aaKnown RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 CCL20P78556 96 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 PLAURQ03405 335 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ETFRF1Q6IPR1 90 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 MRGPRGQ86SM5 289 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ATOH7Q8N100 152 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 NOL4LQ96MY1 436 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 COLQQ9Y215 455 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 NPTNQ9Y639 398 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 MPDZO75970 2070 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 CEP250Q9BV73 2442 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 TSC2P49815 1807 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 TRAV17A0A0B4J275 112 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 IGKV1D-13A0A0B4J2D9 117 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 A0A1B0GV90 55 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 LINC00587B1AMM8 73 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 PTBP3O95758 552 aaKnown RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 CYB5R3P00387 301 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 IGKV1-13P0DP09 117 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ZNF25P17030 456 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 USF1P22415 310 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 CD1BP29016 333 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 PRDX2P32119 198 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FOXG1P55316 489 aaPredicted RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 MUC15Q8N387 334 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 CPEB3Q8NE35 698 aaKnown RBP3.25□□□□□ -1.89
RNF38-210ENST00000611646 CORO2AQ92828 525 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 WDR54Q9H977 334 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FKBP11Q9NYL4 201 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 KIAA1456Q9P272 454 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FRYQ5TBA9 3013 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 FREM3P0C091 2139 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 K7EQM0 130 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 TCAPO15273 167 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 HRASP01112 189 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 CD55P08174 381 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 RNF224P0DH78 156 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 Q56UQ5 140 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 RPL39P5Q59GN2 51 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 LRRC10Q5BKY1 277 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ABLIM2Q6H8Q1 611 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 HCP5Q6MZN7 132 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 Q6ZN92 141 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ZNRF1Q8ND25 227 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 ZNF596Q8TC21 504 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 OIT3Q8WWZ8 545 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 OR2V2Q96R30 315 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 TBX15Q96SF7 602 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 VPS25Q9BRG1 176 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 GGACTQ9BVM4 153 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 WFDC1Q9HC57 220 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 SH2D2AQ9NP31 389 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 HEATR5BQ9P2D3 2071 aa3.25□□□□□ -1.89
RNF38-210ENST00000611646 H0Y980 276 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 LINC01387J3KSC0 135 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 M0R2Z0 102 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 BMPR1BO00238 502 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 CLPSP04118 112 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 GAPDHP04406 335 aaKnown RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 LINC00271P0C7V0 271 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TFF3Q07654 80 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 FHL1Q13642 323 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 GATAD1Q8WUU5 269 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TAF15Q92804 592 aaKnown RBP eCLIP3.24□□□□□ -1.89
RNF38-210ENST00000611646 ATG101Q9BSB4 218 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 RPRMQ9NS64 109 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 TMEM140Q9NV12 185 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PXMP4Q9Y6I8 212 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 KIF26BQ2KJY2 2108 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PTPRDP23468 1912 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 HELTA6NFD8 242 aa3.24□□□□□ -1.89
RNF38-210ENST00000611646 PPIHO43447 177 aaKnown RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 GATCO43716 136 aaKnown RBP3.24□□□□□ -1.89
RNF38-210ENST00000611646 SYNGR3O43761 229 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms