RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MMP23AO75900 390 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 SERPINE2P07093 398 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 CCL3L1P16619 93 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 GPR12P47775 334 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF134P52741 427 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF66Q6ZN08 573 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 PPP1R1CQ8WVI7 109 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 CCL19Q99731 98 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ABHD14AQ9BUJ0 271 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF462Q96JM2 2506 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 L7N2F9 121 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 DLX6P56179 175 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 CATR1Q13166 79 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 CT45A1Q5HYN5 189 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 WDR25Q64LD2 544 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 SLC35G3Q8N808 338 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF439Q8NDP4 499 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 CT45A3Q8NHU0 189 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 C5orf30Q96GV9 206 aa14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 HSD17B10Q99714 261 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-224ENST00000600718 A0A1W2PPH5 198 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 A1L4Q6 167 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 A8MXK9 166 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF16P17020 682 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 CXCL2P19875 107 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 BTN1A1Q13410 526 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 IAH1Q2TAA2 248 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 Q3ZCU0 254 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 TCTEX1D1Q8N7M0 179 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 C8orf46Q8TAG6 207 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 LEAP2Q969E1 77 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 IFI27L2Q9H2X8 130 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 DSCAML1Q8TD84 2053 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 DOPEY1Q5JWR5 2465 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 TRAV14DV4A0A0A6YYC5 116 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 HMSDA8MTL9 139 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 F5H0A9 414 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 IGHV3-7P01780 117 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 PSMB6P28072 239 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 IL15RAQ13261 267 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 TUSC1Q2TAM9 212 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 FAM212BQ9NTI7 297 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 PFDN2Q9UHV9 154 aa14.51□□□□□ -0.09
SHKBP1-224ENST00000600718 SLC31A2O15432 143 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 NMBP08949 121 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 SLC25A4P12235 298 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 PLA2G2AP14555 144 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 CTAG1AP78358 180 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 UTF1Q5T230 341 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 SCARB1Q8WTV0 552 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 GSKIPQ9P0R6 139 aa14.5□□□□□ -0.09
SHKBP1-224ENST00000600718 C17orf98A8MV24 154 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 RPA2P15927 270 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 VDAC1P21796 283 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 GNB2P62879 340 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 RPL30P62888 115 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 C11orf87Q6NUJ2 197 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 BTNL3Q6UXE8 466 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 SLC25A48Q6ZT89 311 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 PPIAL4CA0A0B4J2A2 164 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 J3QKU1 62 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 RAB29O14966 203 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 IGHV4-39P01824 125 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 PPIAL4GP0DN37 164 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 ERVFRD-1P60508 538 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 LRRC37A5PQ49AS3 106 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF585BQ52M93 769 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 LY6G5BQ8NDX9 201 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 THAP6Q8TBB0 222 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 TCTEX1D2Q8WW35 142 aa14.49□□□□□ -0.09
SHKBP1-224ENST00000600718 HRNRQ86YZ3 2850 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 FXYD6-FXYD2A0A087WZ82 144 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 PROP1O75360 226 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 FGF2P09038 288 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 PDLIM4P50479 330 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 HSD17B13Q7Z5P4 300 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 EIF4E3Q8N5X7 224 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 C8orf31Q8N9H6 132 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 SPIN2AQ99865 258 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 SPIN2BQ9BPZ2 258 aa14.48□□□□□ -0.09
SHKBP1-224ENST00000600718 A0A1W2PPE3 182 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 RBP4P02753 201 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 S100A11P31949 105 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 DUTP33316 252 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 GNG10P50151 68 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF295-AS1Q8N0V1 137 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 C11orf42Q8N5U0 333 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF525Q8N782 197 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 CXorf58Q96LI9 332 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 SSBP3Q9BWW4 388 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 A0A087X0M5 115 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 A0A1B0GX30 115 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 M0R1X1 148 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 IGHV1-8P0DP01 117 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 LPAR6P43657 344 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 ZNF546Q86UE3 836 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 ODF3L1Q8IXM7 274 aa14.47□□□□□ -0.09
SHKBP1-224ENST00000600718 LYG1Q8N1E2 194 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms