RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CABLES2Q9BTV7 478 aa17.76■□□□□ 0.43
CCDC9-204ENST00000599398 CENPOQ9BU64 300 aa17.76■□□□□ 0.43
CCDC9-204ENST00000599398 ELF5Q9UKW6 265 aaPredicted RBP17.76■□□□□ 0.43
CCDC9-204ENST00000599398 WASHC3Q9Y3C0 194 aa17.76■□□□□ 0.43
CCDC9-204ENST00000599398 HLA-DRB1P01911 266 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 IGLL1P15814 213 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 PLGLAQ15195 96 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 CXorf66Q5JRM2 361 aaPredicted RBP17.75■□□□□ 0.43
CCDC9-204ENST00000599398 LIN54Q6MZP7 749 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 LCNL1Q6ZST4 164 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 C8orf86Q6ZUL3 223 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 WFDC9Q8NEX5 89 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 NPBQ8NG41 125 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 GINS4Q9BRT9 223 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 VCX3AQ9NNX9 186 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 PARP11Q9NR21 331 aa17.75■□□□□ 0.43
CCDC9-204ENST00000599398 SCGNO76038 276 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 NDUFA3O95167 84 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 PRB2P02812 416 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-204ENST00000599398 IGF1P05019 195 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 RPLP1P05386 114 aaKnown RBP17.74■□□□□ 0.43
CCDC9-204ENST00000599398 OR8U9P0C7N5 309 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 OR5H8P0DN80 308 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 IDNKQ5T6J7 187 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 KPRPQ5T749 579 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-204ENST00000599398 TSPAN14Q8NG11 270 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 OR5AN1Q8NGI8 311 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 OR8U1Q8NH10 309 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 OR2D2Q9H210 308 aa17.74■□□□□ 0.43
CCDC9-204ENST00000599398 RBM7Q9Y580 266 aaKnown RBP17.74■□□□□ 0.43
CCDC9-204ENST00000599398 A0A087WXM4 84 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 TRBV6-7A0A0A0MS04 114 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 M0R1X1 148 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 PROP1O75360 226 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 RBBP9O75884 186 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 TNFAIP8O95379 198 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 TFAP2AP05549 437 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 FOXE3Q13461 319 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 ZNF695Q8IW36 515 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 TOLLIPQ9H0E2 274 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 OR51J1Q9H342 316 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 FBXL15Q9H469 300 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCDC9-204ENST00000599398 RHBDL2Q9NX52 303 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 WSB1Q9Y6I7 421 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 TGP01266 2768 aa17.73■□□□□ 0.43
CCDC9-204ENST00000599398 PRKDCP78527 4128 aaKnown RBP17.72■□□□□ 0.43
CCDC9-204ENST00000599398 IGHV7-81A0A0B4J1V7 117 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 RRHO14718 337 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 ATP6V0E1O15342 81 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 DIRAS3O95661 229 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 APOA2P02652 100 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 ELANEP08246 267 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 DTYMKP23919 212 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 SLC6A1P30531 599 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 LINC00205P59089 165 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 TIMM50Q3ZCQ8 353 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 HACD4Q5VWC8 232 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 ZNF383Q8NA42 475 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.72■□□□□ 0.43
CCDC9-204ENST00000599398 ST6GALNAC5Q9BVH7 336 aa17.72■□□□□ 0.43
CCDC9-204ENST00000599398 IGKV1D-8A0A087WSZ0 117 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 TMEM235A6NFC5 223 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 IGHG4P01861 327 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 THBS3P49746 956 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 GNG2P59768 71 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 CFHR3Q02985 330 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 SRSF7Q16629 238 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC9-204ENST00000599398 ETV3LQ6ZN32 361 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 Q6ZS49 121 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 MRPL41Q8IXM3 137 aaKnown RBP17.71■□□□□ 0.43
CCDC9-204ENST00000599398 OR5H6Q8NGV6 325 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 NUDCD2Q8WVJ2 157 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 ZNF580Q9UK33 172 aa17.71■□□□□ 0.43
CCDC9-204ENST00000599398 G3V318 75 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 RPS16P62249 146 aaKnown RBP17.7■□□□□ 0.42
CCDC9-204ENST00000599398 PITPNAQ00169 270 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 LINC00482Q8N8I6 264 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 ABHD5Q8WTS1 349 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 RCC1LQ96I51 464 aaKnown RBP17.7■□□□□ 0.42
CCDC9-204ENST00000599398 RNF5Q99942 180 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 SDHAF2Q9NX18 166 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 ETV7Q9Y603 341 aa17.7■□□□□ 0.42
CCDC9-204ENST00000599398 TRAV41A0A0B4J266 112 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 AIREO43918 545 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 IGKV1-16P04430 117 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 MYCNOSP40205 109 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 SCAND1P57086 179 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 ZNF260Q3ZCT1 412 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 TMEM65Q6PI78 240 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 PDPNQ86YL7 162 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 RNF152Q8N8N0 203 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 DUX3Q96PT4 197 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 CLCC1Q96S66 551 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 TSNAXQ99598 290 aaKnown RBP17.69■□□□□ 0.42
CCDC9-204ENST00000599398 SLC35D1Q9NTN3 355 aa17.69■□□□□ 0.42
CCDC9-204ENST00000599398 METTL1Q9UBP6 276 aaKnown RBP17.69■□□□□ 0.42
CCDC9-204ENST00000599398 TGFBR1P36897 503 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 ECSCRQ19T08 205 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 FOXB2Q5VYV0 432 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms