RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SNRPGP62308 76 aaKnown RBP6.55□□□□□ -1.36
SMAD4-215ENST00000592911 ATP6AP1Q15904 470 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 C6orf141Q5SZD1 244 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 DDI2Q5TDH0 399 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 RAB12Q6IQ22 244 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 FAM131AQ6UXB0 335 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 LINC00336Q6ZUF6 198 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 SPATA24Q86W54 205 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 FAM223AQ8IWN6 122 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 OR10K1Q8NGX5 313 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 MS4A10Q96PG2 267 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 OVOL2Q9BRP0 275 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 IFI27L2Q9H2X8 130 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 IMPAD1Q9NX62 359 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 ABRACLQ9P1F3 81 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 GHRLQ9UBU3 117 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 ING4Q9UNL4 249 aa6.55□□□□□ -1.36
SMAD4-215ENST00000592911 LOC102724200A0A096LPH7 203 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 LGALS9O00182 355 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 RGS13O14921 159 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CDRT1O95170 752 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CA2P00918 260 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 MAS1P04201 325 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CT45A6P0DMU7 189 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CT45A5P0DMU8 189 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CT45A7P0DMV0 189 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 KIR2DS2P43631 304 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 GBX2P52951 348 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 FXYD3Q14802 87 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 PSG5Q15238 335 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 HMGN3Q15651 99 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 DEFB114Q30KQ6 69 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 DNAL1Q4LDG9 190 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 DMKNQ6E0U4 476 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 MOB1BQ7L9L4 216 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 PRR18Q8N4B5 295 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 BVESQ8NE79 360 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 OR4K15Q8NH41 348 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 DYNLRB2Q8TF09 96 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 OR14A2Q96R54 314 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 ZNF355PQ9NSJ1 428 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 METTL1Q9UBP6 276 aaKnown RBP6.54□□□□□ -1.36
SMAD4-215ENST00000592911 CKLFQ9UBR5 152 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 A3GALT2U3KPV4 340 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
SMAD4-215ENST00000592911 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 KIR2DL5BA0A0G2JN68 375 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 KIR2DL5BA0A0G2JPC4 375 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 H7C2Y5 167 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 FCN1O00602 326 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 MITFO75030 526 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 PDCD6O75340 191 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 CPEP16870 476 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 RCC1P18754 421 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 FASP25445 335 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 PPP1CCP36873 323 aaKnown RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 OR3A3P47888 321 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 APOC4P55056 127 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 ADARB1P78563 741 aaKnown RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 DYRK1AQ13627 763 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 SLC22A6Q4U2R8 563 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 LPCAT4Q643R3 524 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 RPL22L1Q6P5R6 122 aaKnown RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 KIR2DL5AQ8N109 375 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 KIR2DL5BQ8NHK3 375 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 UBALD1Q8TB05 177 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 CASTOR1Q8WTX7 329 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 PTX4Q96A99 478 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 CIB1Q99828 191 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 PDCD1LG2Q9BQ51 273 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 THTPAQ9BU02 230 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-215ENST00000592911 TAS2R4Q9NYW5 299 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 PEX16Q9Y5Y5 336 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 VPS13DQ5THJ4 4388 aa6.53□□□□□ -1.36
SMAD4-215ENST00000592911 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 IZUMO1RA6ND01 250 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 CREBL2O60519 120 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 TUSC2O75896 110 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 APOA2P02652 100 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 CD7P09564 240 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 IGFBP3P17936 291 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 LYG2Q86SG7 212 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 OR52L2PQ8NGH6 319 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 MRPL30Q8TCC3 161 aaKnown RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 THRSPQ92748 146 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 FAM46BQ96A09 425 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 Q96M66 194 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 Q96MT0 163 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 ZNF184Q99676 751 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-215ENST00000592911 UQCC2Q9BRT2 126 aa6.52□□□□□ -1.37
SMAD4-215ENST00000592911 AGMATQ9BSE5 352 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms