RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-209ENST00000572760 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 CRYBA1P05813 215 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 FAM106CPP0CH98 169 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 AKAIN1P0CW23 69 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 CD24P25063 80 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 MEF2DQ14814 521 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 TRIQKQ629K1 86 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 DHRS11Q6UWP2 260 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 MRPL20Q9BYC9 149 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 CHIAQ9BZP6 476 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 SRRQ9GZT4 340 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 SLC5A7Q9GZV3 580 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
NPLOC4-209ENST00000572760 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 CLDN34H7C241 214 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 AMY2AP04746 511 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 AP3S2P59780 193 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 C16orf87Q6PH81 154 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF645Q8N7E2 425 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 BORCS5Q969J3 196 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF251Q9BRH9 671 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 RAB18Q9NP72 206 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 TCF19Q9Y242 345 aa11.67□□□□□ -0.54
NPLOC4-209ENST00000572760 ANKRD20A5PA0PJZ0 165 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 H7C2Y5 167 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 IGKV1D-33P01593 117 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 IGKV1-33P01594 117 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 APOA2P02652 100 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 CD74P04233 296 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 TMEM11P17152 192 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 CD1BP29016 333 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 FAUP35544 74 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 LSAMPQ13449 338 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 HNF4GQ14541 408 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 SCGB2B2Q4G0G5 96 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 GLDNQ6ZMI3 551 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 DRAXINQ8NBI3 349 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 PIFOQ8TCI5 191 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 CFHR4Q92496 578 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
NPLOC4-209ENST00000572760 A6NDX4 124 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 GPR137BO60478 399 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 CT45A6P0DMU7 189 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 CT45A5P0DMU8 189 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 CT45A7P0DMV0 189 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 MC5RP33032 325 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 THBS3P49746 956 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 ZNF660Q6AZW8 331 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 TMEM219Q86XT9 240 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 OR4D10Q8NGI6 311 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 OR4C16Q8NGL9 310 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
NPLOC4-209ENST00000572760 OR5H14A6NHG9 310 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 PROP1O75360 226 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 MOSP00540 346 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 PGAM2P15259 253 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 S100GP29377 79 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 CBX3Q13185 183 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 HABP2Q14520 560 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 ZNF846Q147U1 533 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 BAK1Q16611 211 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 MFSD4AQ8N468 514 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 TRIM63Q969Q1 353 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 SLC25A33Q9BSK2 321 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 WDR12Q9GZL7 423 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
NPLOC4-209ENST00000572760 FAM181BA6NEQ2 426 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms