RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CD83Q01151 205 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 SRSF4Q08170 494 aaKnown RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 ANKRD55Q3KP44 614 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 PRSS57Q6UWY2 283 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 OR13D1Q8NGV5 346 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM186Q96B77 213 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 MSI2Q96DH6 328 aaKnown RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 ADTRPQ96IZ2 230 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 TP53RKQ96S44 253 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 CLEC7AQ9BXN2 247 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 IFI27L2Q9H2X8 130 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 METTL8Q9H825 291 aaKnown RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 UNKLQ9H9P5 680 aaKnown RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 RANGRFQ9HD47 186 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 ONECUT1Q9UBC0 465 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 TMED3Q9Y3Q3 217 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 KPTNQ9Y664 436 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 CSMD2Q7Z408 3487 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 PDZD2O15018 2839 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV4-30-2A0A087WSY4 118 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 SAA2-SAA4A0A096LPE2 208 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 GOSR2O14653 212 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 SLC31A2O15432 143 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 TNFSF12O43508 249 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ATG12O94817 140 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 SERPINE2P07093 398 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 HNRNPCP07910 306 aaKnown RBP eCLIP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 SAA2P0DJI9 122 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 PRTN3P24158 256 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ZFP36P26651 326 aaKnown RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 IL3RAP26951 378 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 DUTP33316 252 aaKnown RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 KIR2DS2P43631 304 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 THBS3P49746 956 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 GNG10P50151 68 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF137PP52743 207 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ARF6P62330 175 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 TAGLNQ01995 201 aaKnown RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 PAX2Q02962 417 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 SP6Q3SY56 376 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 FAM53AQ6NSI3 398 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 GSG1LQ6UXU4 331 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF695Q8IW36 515 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ODF3L1Q8IXM7 274 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 LYG1Q8N1E2 194 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 ABHD12Q8N2K0 398 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 BEND2Q8NDZ0 799 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 OR10X1Q8NGY0 326 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 OR51H1Q8NH63 302 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 CD300LFQ8TDQ1 290 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 RBPMSQ93062 196 aaKnown RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 LEAP2Q969E1 77 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 NMES1Q9C002 83 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 RANBP3Q9H6Z4 567 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 HEXA-AS1Q9H8Q6 139 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 PRELID3BQ9Y3B1 194 aa7.04□□□□□ -1.28
TRAF3-209ENST00000560463 AMMECR1Q9Y4X0 333 aaPredicted RBP7.04□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV2-26A0A0B4J1V2 119 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV4-61A0A0C4DH41 118 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 A0A1W2PPE3 182 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 RBFOX2O43251 390 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 TXNL1O43396 289 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 PROP1O75360 226 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 SNAPC5O75971 98 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV3-7P01780 117 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 C1QBP02746 253 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 HOXB5P09067 269 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 VDAC1P21796 283 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 USF1P22415 310 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 H2BFSP57053 126 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 LCN2P80188 198 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 FGL1Q08830 312 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 C2orf68Q2NKX9 166 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM268Q5VZI3 342 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 BTNL3Q6UXE8 466 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF833PQ6ZTB9 187 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 SELENOHQ8IZQ5 122 aaKnown RBP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 Q8N7P7 452 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 OR11H6Q8NGC7 330 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 TCTEX1D2Q8WW35 142 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 LSM10Q969L4 123 aaKnown RBP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 FYTTD1Q96QD9 318 aaKnown RBP7.03□□□□□ -1.28
TRAF3-209ENST00000560463 SPIN2AQ99865 258 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 SPIN2BQ9BPZ2 258 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF251Q9BRH9 671 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 PDCD10Q9BUL8 212 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ZFP57Q9NU63 452 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 PLXNB1O43157 2135 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ITPR3Q14573 2671 aa7.03□□□□□ -1.28
TRAF3-209ENST00000560463 ABCA1O95477 2261 aa7.02□□□□□ -1.29
TRAF3-209ENST00000560463 TEX15Q9BXT5 2789 aa7.02□□□□□ -1.29
TRAF3-209ENST00000560463 C5orf51A6NDU8 294 aa7.02□□□□□ -1.29
TRAF3-209ENST00000560463 LINC00473A8K010 186 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms